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Plant viruses

Section Editor: Chikara Masuta, Hokkaido University, Japan
Deputy Section Editor: Supriya Chakraborty, Jawaharlal Nehru University, India

The Plant viruses section of Virology Journal covers studies on all aspects of plant viruses including viral structure, gene function, genetics, virus-host interactions, viral pathogenesis, epidemiology, host resistance, RNA silencing and so on. Also this section publishes studies involving useful methodological application such as diagnostic technology and metagenomics.

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  1. A variety of cis-acting RNA elements with structures in the 5′- or 3′-untranslated region (UTR) of viral genomes play key roles in viral translation. Cherry virus A (CVA) is a member of the genus Capillovirus in ...

    Authors: Deya Wang, Chen Yang, Yanmei Deng, Xue Cao, Wei Xu, Zishuo Han, Qingliang Li, Yang Yang and Xuefeng Yuan
    Citation: Virology Journal 2022 19:91
  2. In research questions such as in resistance breeding against the Beet necrotic yellow vein virus it is of interest to compare the virus concentrations of samples from different groups. The enzyme-linked immunosor...

    Authors: Thomas M. Lange, Maria Rotärmel, Dominik Müller, Gregory S. Mahone, Friedrich Kopisch-Obuch, Harald Keunecke and Armin O. Schmitt
    Citation: Virology Journal 2022 19:85
  3. Promoters are important factors affecting gene expression in cells. The driven activities of viral promoters were generally assessed to screen available promoters for transgenic and research and biotech indust...

    Authors: Lei Jiang, Jing Chen, You-zhi Yang, Rui Li, Shuang Li, Zhan-qi Wang and Tong Jiang
    Citation: Virology Journal 2022 19:60
  4. Inclusion of high throughput technologies in the field of biology has generated massive amounts of data in the recent years. Now, transforming these huge volumes of data into knowledge is the primary challenge...

    Authors: Dibyendu Ghosh, Srija Chakraborty, Hariprasad Kodamana and Supriya Chakraborty
    Citation: Virology Journal 2022 19:42
  5. The phenylalanine ammonia lyase genes play crucial role in plant response to biotic and abiotic stresses. In this study, we characterized the role of PAL genes in increasing resistance to the Cassava brown streak...

    Authors: Siji Kavil, Gerald Otti, Sophie Bouvaine, Andrew Armitage and Midatharahally N. Maruthi
    Citation: Virology Journal 2021 18:184
  6. Viral diseases cause significant damage to crop yield and quality. While fungi- and bacteria-induced diseases can be controlled by pesticides, no effective approaches are available to control viruses with chem...

    Authors: Md. Shamim Akhter, Kenji S. Nakahara and Chikara Masuta
    Citation: Virology Journal 2021 18:176
  7. Certification of seed potato as free of viruses is essential for stable potato production. Among more than 30 virus species infecting potato, potato leafroll virus (PLRV), potato virus S (PVS), potato virus X ...

    Authors: Nobuya Onozuka, Takehiro Ohki, Norikuni Oka and Tetsuo Maoka
    Citation: Virology Journal 2021 18:131
  8. Circularization of RNA mediated by association of translation factors and RNA elements in 5′ and 3′ UTRs is a common feature for translation control in eukaryotes. There is no information about translation in ...

    Authors: Ghobad Babaei, Amir Massah and Mina Koohi Habibi
    Citation: Virology Journal 2021 18:129
  9. Cassava mosaic disease (CMD) is one of the most devastating viral diseases for cassava production in Africa and Asia. Accurate yet affordable diagnostics are one of the fundamental tools supporting successful ...

    Authors: Saengsoon Charoenvilaisiri, Channarong Seepiban, Mallika Kumpoosiri, Sombat Rukpratanporn, Nuchnard Warin, Bencharong Phuangrat, Phakamat Chitchuea, Sirima Siripaitoon, Orawan Chatchawankanphanich and Oraprapai Gajanandana
    Citation: Virology Journal 2021 18:100
  10. Citrus industry is worldwide dramatically affected by outbreaks of Citrus tristeza virus (CTV). Controls should be applied to nurseries, which could act as diversity hotspots for CTV. Early detection and chara...

    Authors: Aderito Tomàs Pais da Cunha, Michela Chiumenti, Laurindo Chambula Ladeira, Raied Abou Kubaa, Giuliana Loconsole, Vitantonio Pantaleo and Angelantonio Minafra
    Citation: Virology Journal 2021 18:62
  11. High-throughput sequencing (HTS) has been applied successfully for virus and viroid discovery in many agricultural crops leading to the current drive to apply this technology in routine pathogen detection. The...

    Authors: Rachelle Bester, Glynnis Cook, Johannes H. J. Breytenbach, Chanel Steyn, Rochelle De Bruyn and Hans J. Maree
    Citation: Virology Journal 2021 18:61
  12. Pepper vein yellows viruses (PeVYV) are phloem-restricted viruses in the genus Polerovirus, family Luteoviridae. Typical viral symptoms of PeVYV including interveinal yellowing of leaves and upward leaf curling w...

    Authors: Kuangjie Zhao, Yueyan Yin, Mengying Hua, Shaoxiang Wang, Xiaohan Mo, Enping Yuan, Hongying Zheng, Lin Lin, Hairu Chen, Yuwen Lu, Jianping Chen, Jiejun Peng and Fei Yan
    Citation: Virology Journal 2021 18:42
  13. Tobamoviruses, including tomato brown rugose fruit virus (ToBRFV) on tomato and pepper, and cucumber green mottle mosaic virus (CGMMV) on cucumber and watermelon, have caused many disease outbreaks around the ...

    Authors: Bidisha Chanda, Md Shamimuzzaman, Andrea Gilliard and Kai-Shu Ling
    Citation: Virology Journal 2021 18:7
  14. Tomato production is threatened worldwide by the occurrence of begomoviruses which are associated with tomato leaf curl diseases. There is little information on the molecular properties of tomato begomoviruses...

    Authors: Edith Khamonya Avedi, Adedapo Olutola Adediji, Dora Chao Kilalo, Florence Mmogi Olubayo, Isaac Macharia, Elijah Miinda Ateka, Eunice Magoma Machuka and Josiah Musembi Mutuku
    Citation: Virology Journal 2021 18:2
  15. The study of transient gene expression in cassava plants during virus infection using existing protocols is laborious and may take approximately fifteen weeks due to cassava’s recalcitrance to transformation. ...

    Authors: Patience Chatukuta and Marie Emma Christine Rey
    Citation: Virology Journal 2020 17:184
  16. Wheat yellow dwarf virus disease is infected by barley yellow dwarf virus (BYDV), which causes leaf yellowing and dwarfing symptoms in wheat, thereby posing a serious threat to China's food production. The inf...

    Authors: Chuan Shen, Caiyan Wei, Jingyuan Li, Xudong Zhang, Qinrong Zhong, Yue Li, Bixin Bai and Yunfeng Wu
    Citation: Virology Journal 2020 17:158
  17. In plants, the RNA silencing system functions as an antiviral defense mechanism following its induction with virus-derived double-stranded RNAs. This occurs through the action of RNA silencing components, incl...

    Authors: Joon Kwon, Atsushi Kasai, Tetsuo Maoka, Chikara Masuta, Teruo Sano and Kenji S. Nakahara
    Citation: Virology Journal 2020 17:149
  18. Milk vetch dwarf virus (MDV) is an important ssDNA virus which causes yellowing, stunting and leaf rolling symptoms on legumes. In China, the virus causes great economic losses and has recently been found to i...

    Authors: Yuhao Cao, Dankan Yan, Xinyang Wu, Ziqiang Chen, Yuchao Lai, Lanqing Lv, Fei Yan, Jianping Chen, Hongying Zheng and Xuemei Song
    Citation: Virology Journal 2020 17:102
  19. In Raphanus sativus (Japanese radish), strain D8 of cucumber mosaic virus (CMV-D8) establishes a systemic infection and induces mild mosaic on upper, non-inoculated leaves, whereas strain Y of CMV (CMV-Y) causes ...

    Authors: Yu Yu Khaing, Yudai Kobayashi and Minoru Takeshita
    Citation: Virology Journal 2020 17:49
  20. Chilli veinal mottle virus (ChiVMV), which belongs to the genus Potyvirus of the family Potyviridae, mainly infects solanaceous plants and has caused serious economic losses in Asia and Africa. Tobacco plants inf...

    Authors: Yubing Jiao, Chuantao Xu, Jialun Li, Yong Gu, Chun Xia, Qiang Xie, Yunbo Xie, Mengnan An, Zihao Xia and Yuanhua Wu
    Citation: Virology Journal 2020 17:33
  21. Developing African countries face health problems that they struggle to solve. The major causes of this situation are high therapeutic and logistical costs. Plant-made therapeutics are easy to produce due to t...

    Authors: Pingdwende Kader Aziz Bamogo, Christophe Brugidou, Drissa Sérémé, Fidèle Tiendrébéogo, Florencia Wendkuuni Djigma, Jacques Simpore and Séverine Lacombe
    Citation: Virology Journal 2019 16:167
  22. Rice stripe mosaic virus (RSMV) is a tentative new Cytorhabdovirus species in family Rhabdoviridae transmitted by the leafhopper Recilia dorsalis. Although the virus was first detected in southern China in 2015, ...

    Authors: Siping Chen, Weilin Li, Xiuqin Huang, Biao Chen, Tong Zhang and Guohui Zhou
    Citation: Virology Journal 2019 16:145
  23. Rice stripe virus (RSV) causes one of the most important rice virus diseases of plants in East Asia. However, the molecular mechanisms controlling rice resistance to RSV infection are largely unknown. Recently, s...

    Authors: Rongfei Lu, Zhiyang Liu, Yudong Shao, Feng Sun, Yali Zhang, Jin Cui, Yijun Zhou, Wenbiao Shen and Tong Zhou
    Citation: Virology Journal 2019 16:141
  24. In Oman tobacco (Nicotiana tabacum; family Solanaceae) is a minor crop, which is produced only for local consumption. In 2015, tobacco plants exhibiting severe downward leaf curling, leaf thickening, vein swellin...

    Authors: Muhammad Shafiq Shahid, Muhammad Shafiq, Amir Raza, Abdullah M. Al-Sadi and Rob W. Briddon
    Citation: Virology Journal 2019 16:131
  25. MicroRNAs (miRNAs) are a class of 21–24 nucleotide endogenous non-coding small RNAs that play important roles in plant development and defense responses to biotic and abiotic stresses. Tobacco curly shoot viru...

    Authors: Jiang Du, Gentu Wu, Zhongpiao Zhou, Jiayuan Zhang, Mingjun Li, Miao Sun, Kairong Jiang and Ling Qing
    Citation: Virology Journal 2019 16:130
  26. Plant viruses can affect vector’s behaviors in order to enhance viral transmission. Cucurbit chlorotic yellows virus (CCYV) (genus Crinivirus) is an emergent RNA plant virus and is transmitted specifically by bio...

    Authors: Shaohua Lu, Mingshun Chen, Jingjing Li, Yan Shi, Qinsheng Gu and Fengming Yan
    Citation: Virology Journal 2019 16:106
  27. A tenuivirus, referred to here as JKI 29327, was isolated from a black medic (Medicago lupulina) plant collected in Austria. The virus was mechanically transmitted to Nicotiana benthamiana, M. lupulina, M. sativa

    Authors: Yahya Z. A. Gaafar, Katja R. Richert-Pöggeler, Angelika Sieg-Müller, Petra Lüddecke, Kerstin Herz, Jonas Hartrick, Yvonne Seide, Heinrich-Josef Vetten and Heiko Ziebell
    Citation: Virology Journal 2019 16:89
  28. Cucurbit chlorotic yellows virus (CCYV) is a bipartite cucurbit-infecting crinivirus within the family Closteroviridae. The crinivirus genome varies among genera. P4.9 is the first protein encoded by CCYV RNA2. P...

    Authors: Ying Wei, Yajuan Shi, Xaioyu Han, Siyu Chen, Honglian Li, Linlin Chen, Bingjian Sun and Yan Shi
    Citation: Virology Journal 2019 16:82
  29. A novel nepovirus was identified and characterised from caraway, and tentatively named caraway yellows virus (CawYV). Tubular structures with isomeric virus particles typical for nepoviruses were observed in i...

    Authors: Yahya Z. A. Gaafar, Katja R. Richert-Pöggeler, Angelika Sieg-Müller, Petra Lüddecke, Kerstin Herz, Jonas Hartrick, Christina Maaß, Roswitha Ulrich and Heiko Ziebell
    Citation: Virology Journal 2019 16:70
  30. Nucleorhabdoviruses possess bacilliform particles which contain a single-stranded negative-sense RNA genome. They replicate and mature in the nucleus of infected cells. Together with viruses of three other gen...

    Authors: Yahya Z. A. Gaafar, Katja R. Richert-Pöggeler, Christina Maaß, Heinrich-Josef Vetten and Heiko Ziebell
    Citation: Virology Journal 2019 16:55
  31. Rice black-streaked dwarf virus (RBSDV) and Southern rice black-streaked dwarf virus (SRBSDV) seriously interfered in the production of rice and maize in China. These two viruses are members of the genus Fijiviru...

    Authors: Zenghui Wang, Chengming Yu, Yuanhao Peng, Chengshi Ding, Qingliang Li, Deya Wang and Xuefeng Yuan
    Citation: Virology Journal 2019 16:53
  32. Tobacco production in China has been affected by plant viruses with Milk vetch dwarf virus (MDV) as a recent invader posing serious concern. According to most of the studies, MDV mainly infects hosts from Faba...

    Authors: Ali Kamran, Han Hou, Yi Xie, Cunxiao Zhao, Xiaomin Wei, Chaoqun Zhang, Xiangwen Yu, Fenglong Wang and Jinguang Yang
    Citation: Virology Journal 2019 16:38
  33. Cross protection is a promising alternative to control plant viral diseases. One critical factor limiting the application of cross protection is the availability of attenuated mutants or mild strains. Potato viru...

    Authors: Q. Q. Cong, Y. Wang, J. Liu, Y. F. Lan, Z. K. Guo, J. G. Yang, X.-D. Li and Y. P. Tian
    Citation: Virology Journal 2019 16:36
  34. Viruses in the genus Begomovirus (Family Geminiviridae) include many important economic plant viruses transmitted by whiteflies of the Bemisia tabaci species complex. In general, different begomoviruses may be ac...

    Authors: Jing Zhao, Yao Chi, Xin-Jia Zhang, Teng Lei, Xiao-Wei Wang and Shu-Sheng Liu
    Citation: Virology Journal 2019 16:32
  35. Polyadenylation influences many aspects of mRNA as well as viral RNA. variable polyadenylation at the 3' end have been reported in RNA viruses. It is interesting to identify the characteristic and potential ro...

    Authors: Guowei Geng, Chengming Yu, Xiangdong Li and Xuefeng Yuan
    Citation: Virology Journal 2019 16:23
  36. Infectious cDNA clones are a powerful tool for studies on RNA viruses using reverse genetics. Potato virus S (PVS) is a carlavirus with a worldwide distribution. Although the complete genome sequences of many ...

    Authors: Xin Li and Tatsuji Hataya
    Citation: Virology Journal 2019 16:18
  37. Tomato torrado virus (ToTV) infection manifests with burn-like symptoms on leaves, leaflets and upper stem parts of susceptible infected plants. The symptoms caused by ToTV may be considered as one of the most se...

    Authors: Przemysław Wieczorek, Barbara Wrzesińska, Patryk Frąckowiak, Arnika Przybylska and Aleksandra Obrępalska-Stęplowska
    Citation: Virology Journal 2019 16:9
  38. Tospoviruses (genus Tospovirus, family Peribunyaviridae, order Bunyavirales) cause significant losses to a wide range of agronomic and horticultural crops worldwide. Identification and characterization of specifi...

    Authors: Cristian Olaya, Badri Adhikari, Gaurav Raikhy, Jianlin Cheng and Hanu R. Pappu
    Citation: Virology Journal 2019 16:7
  39. Hevea brasiliensis is an important commercial crop due to the high quality of the latex it produces; however, little is known about viral infections in this plant. The only virus described to infect H. brasiliens...

    Authors: Paula L. C. Fonseca, Fernanda Badotti, Tatiana F. P. de Oliveira, Antônio Fonseca, Aline B. M. Vaz, Luiz M. R. Tomé, Jônatas S. Abrahão, João T. Marques, Giliane S. Trindade, Priscila Chaverri, Eric R. G. R. Aguiar and Aristóteles Góes-Neto
    Citation: Virology Journal 2018 15:184
  40. Viral disease has become the most severe constraint for the cultivation and production of Passiflora edulis in China. The infection of Telosma mosaic virus (TeMV), a potyvirus, and its effects on the phytochemica...

    Authors: Shuangshuang Chen, Nannan Yu, Shaohuan Yang, Baoping Zhong and Hanhong Lan
    Citation: Virology Journal 2018 15:168
  41. The non-translated regions at the genome ends of RNA viruses serve diverse functions and can exhibit various levels of nucleotide (nt) heterogeneity. However, the extent of nt heterogeneity at the extreme term...

    Authors: Angel Y. S. Chen, Shizu Watanabe, Raymond Yokomi and James C. K. Ng
    Citation: Virology Journal 2018 15:141
  42. Tobacco curly shoot virus (TbCSV) is a monopartite begomovirus associated with betasatellite (Tobacco curly shoot betasatellite, TbCSB), which causes serious leaf curl disease on tomato and tobacco in China. It i...

    Authors: Ke Li, Gentu Wu, Mingjun Li, Mingge Ma, Jiang Du, Miao Sun, Xianchao Sun and Ling Qing
    Citation: Virology Journal 2018 15:138