- Open Access
Enhanced anti-HCV activity of interferon alpha 17 subtype
© Dubois et al; licensee BioMed Central Ltd. 2009
- Received: 06 February 2009
- Accepted: 03 June 2009
- Published: 03 June 2009
Pegylated interferon alpha 2 (a or b) plus ribavirin is the most effective treatment of chronic hepatitis C but a large proportion of patients do not respond to therapy. So, it is interesting to improve the treatment efficacy. Interferon alpha is a type I interferon composed of 12 different subtypes. Each subtype signals by the Jak-Stat pathway but modulations in the antiviral activity was previously described.
Using the hepatitis C virus (HCV) culture system, we have tested the anti-HCV activity of each interferon alpha subtypes. We have analyzed the effect of each subtype on the HCV multiplication and the cell-signaling pathway for some subtypes.
There were divergent effects of IFN alpha subtypes against HCV. We have found that IFN alpha 17 was three times more efficient than IFN alpha 2a on HCV. This efficiency was related to a stronger stimulation of the Jak-Stat pathway.
We suggest that IFN α17 should be tested therapeutically with a view to improving treatment efficacy.
- Huh7 Cell
- Pegylated Interferon Alpha
- Interferon Alpha Subtype
The hepatitis C virus (HCV) is one of the main known causes of liver diseases such as cirrhosis and hepatocellular carcinoma (HCC) [1, 2]. Infection with HCV is a major public health problem; it has been estimated that 3% of the world's population is chronically infected. Indeed, in many countries, HCV is the most common cause for liver transplantation [3, 4]. Current therapy is based on pegylated interferon alpha 2a or 2b, in combination with ribavirin . Nevertheless, combination therapy is not fully effective (with only approximately 55% of patients showing a sustained virological response) and its frequent side-effects reduce health-related quality of life in many patients . Improvement of HCV therapy implies (i) to gain a better understanding of the mechanism of action of current treatments and (ii) to develop novel anti-HCV molecules [6, 7]. Recent data concerning new molecules (such as anti-polymerases and anti-proteases) used in monotherapy have shown that escape mutants are rapidly selected for. Hence, administering these molecules in combination with interferon may be one way of improving treatment efficacy [8–11].
Interferon alpha (IFN-α) is a cytokine that has many biological properties; it is antiviral and antiproliferative and stimulates cytotoxic activity in a variety of immune system cells . Interferon alpha is a member of the type I interferon family, comprising cytokines that bind to the same receptor (the interferon α/β receptor, IFNAR) to initiate a signaling response . Several subtypes of IFN-α (12 proteins encoding by 14 genes) and many allelic variants have been described. Interferon alpha subtypes exhibit a very high degree of amino-acid similarity (over 75%) but the reason for the existence of so many distinct proteins is still unknown [12, 13]. Although each subtype displays a unique activity profile [12, 14], only IFN-α2a and IFN-α2b subtypes are currently used for the treatment of chronic HCV infection. After binding to the IFNAR, IFN-α signals mainly through the Jak-Stat pathway. The Janus kinases Jak-1 and Tyk-2 are then phosphorylated and, in turn, phosphorylate STAT proteins, which multimerize and associate with IRF-9 to form ISGF3 (interferon-stimulated gene factor 3). This complex translocates to the nucleus and targets the ISRE (interferon-stimulated response element) sequences present within the promoters of interferon-stimulated genes (ISGs) coding for (amongst others) a number of antiviral proteins, including the well-characterized antiviral PKR protein (double-stranded RNA-dependent protein kinase), 2'-5' oligoadenylate synthetase (2-5OAS) and MxA .
Several studies have focused on the differing degrees of antiviral action produced by the various IFN-α subtypes. Foster et al. have shown that IFN-α8 was the most potent subtype in various human cell lines infected with murine encephalomyocarditis virus (EMCV), whereas IFN-α1 had very little antiviral effect in the same system . These results were confirmed by Yamamoto et al. in human hepatic cell lines infected by vesicular stomatitis virus (VSV) . The antiviral effects of IFN-α subtypes on HCV has also been studied using subgenomic replicons . Koyama et al. have demonstrated that the various IFN-α subtypes differ in terms of their anti-HCV actions and that IFN-α8 was the most effective inhibitor of intracellular HCV replication. These authors' results suggest that this differential effect may be exerted through JAK-STAT-independent pathways .
The recently developed HCV cell culture (HCVcc) system uses a JFH-1 genotype 2a strain of HCV and enables investigation of the overall viral life cycle . In the present work, we used this system to determine the anti-HCV activity of twelve recombinant IFN-α subtypes. The antiviral action of each subtype was compared with that of IFN-α2a (i.e. the subtype used in therapy) by measuring intracellular viral replication and the production of infectious virions. Having found that IFN-α17 displayed the highest anti-HCV activity, we then explored the transduction pathways which could explain this heightened ability. Our results show that IFN-α17's anti-HCV activity may be accounted for by stronger activation of the JAK-STAT pathway and thus higher antiviral protein expression levels.
Cell culture and viral infection
Huh7 human hepatoma cells were cultured in Dulbecco's modified Eagle's medium (DMEM) (Jacques Boy, Reims, France) supplemented with 10% fetal calf serum and maintained in 5% CO2 at 37°C. JFH-1 viral stock preparation and titration were performed exactly as described previously .
Recombinant interferon alpha subtypes
Specific activity of each interferon alpha subtype.
Specific activity (IU/mg)
Specific activity (IU/mg)
IFN-α 1 (D)
IFN-α 8 (B2)
IFN-α 2a (A)
IFN-α 10 (C)
IFN-α 14 (H2)
IFN-α 5 (G)
IFN-α 16 (WA)
IFN-α 6 (K)
IFN-α 17 (I)
IFN-α 7 (J1)
IFN-α 21 (F)
Determination of anti-HCV efficacy
Huh7 cells were infected with JFH-1 at a multiplicity of infection (MOI) of 0.001. After three weeks of infection, chronically infected cells were seeded in 24-well plates at a density of 70,000 cells/well in medium (DMEM supplemented with 10% fetal calf serum) containing different IFN-α subtypes at a concentration of 260 pg/mL. After 48 hours of incubation at 37°C, the supernatants were harvested and the virus yield was measured using a focus-forming unit (FFU) assay. The cells were washed twice with phosphate-buffered saline (PBS) and then trypsinized in order to perform HCV RNA quantification.
Intracellular HCV RNA quantification
Total RNA was extracted from the cells using the RNeasy Mini kit ("Animal cell spin" protocol) from Qiagen (Courtaboeuf, France), according to the manufacturer's instructions. HCV RNA quantification was performed with a real-time RT-PCR assay, as previously described . At the same time, β-actin RNA was quantified by including 1.25 μ L of human β-actin mix (Applied Biosystems, Coutaboeuf, France) in the PCR mix reaction instead of the HCV primers and probe. Each IFN-α subtype's inhibitory activity on the JFH-1 strain was calculated by using β-actin gene as a housekeeping gene and applying the comparative Ct method, as previously described .
Viral yield assay (FFUs)
35,000 cells were seeded into 24-well plates and infected with the supernatants at different dilutions (1 to 10-2). After 6 hours of incubation, the medium was replaced with fresh medium (DMEM supplemented with 10% fetal calf serum). After 3 days, an immuno-peroxydase reaction was performed as previously described . Focus-forming units were counted for each dilution and normalized to 1 mL
IFN subtype IC50 determination
50,000 Huh7 cells were seeded into 24-well plates and infected with 200 μ L of the JFH-1 strain (MOI = 0.1) at different dilutions (10-2 to 10-4). After 18 hours of incubation, the medium was replaced by fresh medium containing IFN-α subtypes at different concentrations (0, 1.3, 2.6, 5.2, 13 and 26 pg/mL). After 2 days of culture, FFUs were quantified, as previously described. The concentration that inhibited 50% of the yield (i.e. the IC50) was calculated for each condition.
Interferon-stimulated response element luciferase reporter assay
Huh7 cells were seeded into 96-well plates at a density of 20,000 cells per well. The following day, the culture medium was replaced by fresh medium. Fours hour later, each well was transfected with 250 ng of the pMx-GFP-luc plasmid by using the calcium phosphate precipitation technique (CalPhos Mammalian Transfection kit, Clontech, Saint-Germain en Laye, France) according to the manufacturer's instructions. The plasmid had been constructed by inserting the human MxA promoter  into the pEGFPLuc vector (Clontech). On the following day, IFNs were applied to the culture medium at various concentrations (0, 26 and 260 pg/mL). After 18 hours, cells were lysed and luciferase activity was quantified using the Luciferase Assay System (Promega, Charbonnieres-les-bains, France) in a luminometer (Lumat, Berthold, Thoiry, France).
Transcriptome studies using a low-density array
300,000 chronically-infected Huh7 cells were seeded into 6-well plates and incubated with IFN-α2a, IFN-α17 or IFN-α1 (at 260 pg/mL in all cases). After 48 hours, total RNA was extracted from the cells and reverse-transcribed into cDNA, as previously described. The TaqMan® Low Density Array (TLDA) is a 384-well microfluidic card that enables the performance of 384 simultaneous real-time PCRs. Each 2-μ l well contains specific, user-defined primers and probes capable of detecting a single gene. In the present study, the TLDA card was configured into two 96-gene sets which enabled analysis of gene expression in 2 different conditions. These genes (chosen on the basis of the literature) were present in duplicate and were all expressed under the control of the ISRE . One hundred ng of each cDNA sample were mixed with an appropriate buffer (TaqMan Universal PCR Master Mix from Applied Biosystems), and was transferred into a loading port on the TLDA card. The card was then sealed and PCR amplification was performed using an Applied Biosystems Prism 7900HT sequence detection system. The ΔΔCt method was used for analysis after normalization to β-actine expression.
Western blot analysis
IFNs were added to chronically-infected Huh7 cells at increasing concentrations (0.26, 2.6, 26 and 260 pg/ml) for either 30 minutes or 24 hours. At the indicated time point, cells were washed twice with cold PBS, harvested and then lysed using a buffer (1% NP40, 10% glycerol, 50 mM Tris-HCl pH 7.5, 150 mM NaCl and 0.5 mM PMSF) containing a phosphatase inhibitor cocktail (Sigma Aldrich, France) diluted to 1:100. Total cellular extracts were separated by SDS-PAGE electrophoresis and transferred to nitrocellulose membranes. The membranes were then incubated overnight at 4°C with the primary antibodies. The blots were developed with the chemiluminescence (ECL) system (GE Healthcare) using specific peroxydase conjugated anti IgG (GE Healthcare, Saclay, France) antibodies. The anti-MxA monoclonal antibody (Mab) was a gift from Dr I. Julkunen (Department of Viral Diseases and Immunology, National Public Health Institute, Helsinki, Finland). Anti-Stat1 and anti-PStat1(Tyr701) antibodies were purchased from Cell Signaling Technology and anti-β actin (C4) Mab was purchased from Santa Cruz Biotechnology (Tebu Bio, Le Perray en Yvelines, France).
Statistical data analyses were performed using Student's T test. P-values of 0.05 or less were considered to be significant.
Antiviral activity of different IFNα subtypes on chronic HCV replication and multiplication
Secondly, HCV multiplication was measured using the FFU technique. As shown in Figure 1b, only IFN-α17 was significantly most potent than IFN-α2a, and the results showed a correlation between the activity of IFN-α subtypes on viral replication and that on viral production. However, IFN-α17 stood out due to its major anti-HCV activity.
Determination of the inhibitory concentration 50% (IC50) for IFN-α subtypes 2, 17 and 1
Stimulation of the ISRE-dependent gene by different IFN-α subtypes
Enhanced induction of antiviral proteins by IFNα-17
ISG-RNA expression for IFN-α17 and IFN-α1, relative to IFN-α2a.
Viral clearance in treated, chronically-infected HCV patients occurs in only about 55% of cases. At present, the standard therapy is a ribavirin-PEG-IFNα2 combination. Although the synergistic mechanism of action of this combination is not clearly understood , it is clear that therapeutic optimization is needed to increase the number of sustained virological responders. The aim of the present study was to determine the differential anti-HCV activity of the twelve main IFNα subtypes. We used the HCVcc system to study the subtypes' overall antiviral effects on the HCV life cycle.
We first tested the anti-HCV activity of the different IFNα subtypes by measuring the production of intracellular HCV RNA. Three subtypes (IFN α17, IFN α7 and IFN α8) were significantly more potent than IFN α2. These results are in accordance with other work demonstrating that IFN α8 has good antiviral activity against EMCV and HCV [16, 19]. Little information on IFN α7 is available, although it displayed at least the same anti-HCV efficacy as IFN α2 in our study. This result was confirmed in terms of inhibition of the production of infectious particles, where IFN α17 was three times more potent than IFN α2. Again, this result agrees with previous work reporting that a variant of the IFN α17 subtype was more potent than IFN α2, although a comparison between the variant and the wild subtype was not presented . Our study also confirmed the weak antiviral effect of IFN α1.
Concerning the mechanism of action, IFNα signaling is mainly related to the Jak-Stat pathway. Here, we sought to determine whether or not the higher activity of some subtypes was related to modified stimulation of the Jak-Stat pathway. As shown in the Results section, IFN α17 and IFN α7 prompted better stimulation of the ISRE-dependent genes than IFN α2 did at the same concentration. In contrast, IFN α1 was a poor activator of the Jak-Stat pathway. A Stat1 tyrosine phosphorylation study confirmed that the Jak-Stat pathway modulation was differentially modulated by the various different IFN α subtypes. This suggested that the Jak-Stat pathway was being modulated upstream of Stat phosphorylation. Recent work has detailed the interaction between IFN α2 and its receptor. IFN α2 binds first to IFNAR2 and then recruits IFNAR1. After formation of the ternary complex, the interferon signal is transduced via receptor-associated JAK kinases . Three point mutations increase IFN α2's binding affinity for IFNAR1: H57A, E58A, Q61A. These residues were seen to be conserved in IFN α subtypes and were responsible for the differences in action between IFN β and IFN α . Hence, it seems that modulation of IFN's affinity for the IFNAR1 induces an antiproliferative effect rather than modulating antiviral activity per se. For IFNAR2, six hotspot residues for IFN α2's binding to IFNAR2 were highlighted (30, 33, 144, 147, 148 and 149)  but are conserved in all IFN α subtypes . The weak effect of IFN α1 may be explained by the K31M mutation, which might disrupt the IFNα-IFNAR2 interaction . A recent study of the interferon C-terminus domain has demonstrated that the tail residues are poorly conserved between the different IFN α subtypes and between IFN α and IFN β . Moreover, major differences in the different tails' net charge were observed: IFN α2 has a net charge of 0 and IFN α8 and IFN α17 both have a net charge of 3. The replacement of IFN α2's tail by an IFN α8 tail increased the binding of IFN α2 to IFNAR2 by a factor of 20 and translated into nine-fold higher antiproliferative activity and four-fold higher antiviral activity . These results are in agreement with our own, since IFN α17 and IFN α8 presented the greatest anti-HCV activity. Hence, it is possible that the differences between IFN α17, IFN α1 and IFN α2 in terms of antiviral activity could be due to differing affinities for the IFNAR2.
However, potential differences in affinity for the receptor cannot explain the totality of IFN α8's effect, where no significant increase in activation of the ISRE-dependent pathway was seen. Foster et al. have demonstrated that IFN α8 conserved this activity in U1A cells that do not contain Tyk2, a protein that is essential for IFN signal transduction . Other pathways (such as the PI3K and p38 kinase pathways) have emerged as critical additional components of IFN-induced signal transduction . For IFN α17, the increase in Jak-Stat signaling appears to be the main reason for its higher antiviral activity but stimulation of other pathways cannot be ruled out.
In addition, interferon's antiviral activity may depend on the cell type. In the present study, we used Huh7 cells, since these are the only currently permissive cell line for HCV replication in the HCVcc system. One could hypothesize that the difference in antiviral activity is explained by greater sensitivity of the Huh7 cells to IFN α17. However, very similar results were obtained with bovine Madin-Darby bovine kidney (MDBK) cells containing the chloramphenicol acetyl transferase (CAT) gene under the control of the MxA promoter . It is difficult to say whether the activity differences between the IFN subtypes were due to the cell types or the viruses or both. However, we can hypothesize that the differences of activity are based on the virus type. For instance, the human MxA protein can induce protection against influenza virus or VSV . PKR and 2-5A synthetases were both shown to be involved in resistance to EMCV but not VSV [38, 39]. In this case, ISG induction could be modulated by the IFN subtypes and the transcriptome study may evidence modulation of antiviral-ISG expression and then subtype-specific modulation of the antiviral state. However, it is difficult to imagine how gene-by-gene modulation could be performed by induction of the Jak-stat pathway alone. Hence, cell type could be a factor – perhaps via modulation of the different IFN subtypes' affinity for the IFN receptor (as discussed above) or by stimulation of pathways other than Jak-Stat.
There are few available data on the production of IFN α17. In the context of HCV infection, IFN α5 is the major subtype produced in the liver and by the peripheral blood mononuclear cells (PBMCs) . Hence, natural antiviral activity in the liver does not seem to be optimal in response to HCV infection, when combined with poor induction of the endogenous pathway .
IFN α17 was the IFN α subtype that had the greatest anti-HCV activity in Huh7 cells. It was about three times more potent than the IFN α2 currently used in the clinic and this effect could be explained by stronger stimulation of the Jak-Stat pathway. We suggest that IFN α17 should be tested therapeutically with a view to improve treatment efficacy. It would also be interesting to test the synergy between IFN α17 and ribavirin.
This work was funded by the "Programme Hospitalier de Recherche Clinique de Picardie"(PHRC, 2004) and by the Agence Nationale de Recherche sur le SIDA (ANRS). We thank David Fraser for English corrections.
- Wasley A, Alter MJ: Epidemiology of hepatitis C: geographic differences and temporal trends. Semin Liver Dis 2000, 20: 1-16. 10.1055/s-2000-9506View ArticlePubMedGoogle Scholar
- Alter MJ: The epidemiology of acute and chronic hepatitis C. Clin Liver Dis 1997, 1: 559-568. 10.1016/S1089-3261(05)70321-4View ArticlePubMedGoogle Scholar
- NIH Consensus Statement on Management of Hepatitis C: 2002 NIH Consens State Sci Statements 2002, 19: 1-46.Google Scholar
- Chen SL, Morgan TR: The natural history of hepatitis C virus (HCV) infection. Int J Med Sci 2006, 3: 47-52.PubMed CentralView ArticlePubMedGoogle Scholar
- Younossi Z, Kallman J, Kincaid J: The effects of HCV infection and management on health-related quality of life. Hepatology 2007, 45: 806-816. 10.1002/hep.21565View ArticlePubMedGoogle Scholar
- Chevaliez S, Pawlotsky JM: Hepatitis C virus: virology, diagnosis and management of antiviral therapy. World J Gastroenterol 2007, 13: 2461-2466.PubMed CentralView ArticlePubMedGoogle Scholar
- Pawlotsky JM: Therapy of hepatitis C: from empiricism to eradication. Hepatology 2006, 43: S207-220. 10.1002/hep.21064View ArticlePubMedGoogle Scholar
- Forestier N, Reesink HW, Weegink CJ, McNair L, Kieffer TL, Chu HM, Purdy S, Jansen PL, Zeuzem S: Antiviral activity of telaprevir (VX-950) and peginterferon alfa-2a in patients with hepatitis C. Hepatology 2007, 46: 640-648. 10.1002/hep.21774View ArticlePubMedGoogle Scholar
- Kieffer TL, Sarrazin C, Miller JS, Welker MW, Forestier N, Reesink HW, Kwong AD, Zeuzem S: Telaprevir and pegylated interferon-alpha-2a inhibit wild-type and resistant genotype 1 hepatitis C virus replication in patients. Hepatology 2007, 46: 631-639. 10.1002/hep.21781View ArticlePubMedGoogle Scholar
- Toniutto P, Fabris C, Bitetto D, Fornasiere E, Rapetti R, Pirisi M: Valopicitabine dihydrochloride:a specific polymerase inhibitor of hepatitis C virus. Curr Opin Investig Drugs 2007, 8: 150-158.PubMedGoogle Scholar
- Reesink HW, Zeuzem S, Weegink CJ, Forestier N, van Vliet A, Wetering de Rooij J, McNair L, Purdy S, Kauffman R, Alam J, Jansen PL: Rapid decline of viral RNA in hepatitis C patients treated with VX-950: a phase Ib, placebo-controlled, randomized study. Gastroenterology 2006, 131: 997-1002. 10.1053/j.gastro.2006.07.013View ArticlePubMedGoogle Scholar
- Pestka S, Krause CD, Walter MR: Interferons, interferon-like cytokines, and their receptors. Immunol Rev 2004, 202: 8-32. 10.1111/j.0105-2896.2004.00204.xView ArticlePubMedGoogle Scholar
- Thomas H, Foster G, Platis D: Mechanisms of action of interferon and nucleoside analogues. J Hepatol 2003,39(Suppl 1):S93-98. 10.1016/S0168-8278(03)00207-1View ArticlePubMedGoogle Scholar
- Fish EN, Banerjee K, Stebbing N: Human leukocyte interferon subtypes have different antiproliferative and antiviral activities on human cells. Biochem Biophys Res Commun 1983, 112: 537-546. 10.1016/0006-291X(83)91498-5View ArticlePubMedGoogle Scholar
- Samuel CE: Antiviral actions of interferons. Clin Microbiol Rev 2001, 14: 778-809. 10.1128/CMR.14.4.778-809.2001PubMed CentralView ArticlePubMedGoogle Scholar
- Foster GR, Rodrigues O, Ghouze F, Schulte-Frohlinde E, Testa D, Liao MJ, Stark GR, Leadbeater L, Thomas HC: Different relative activities of human cell-derived interferon-alpha subtypes: IFN-alpha 8 has very high antiviral potency. J Interferon Cytokine Res 1996, 16: 1027-1033.PubMedGoogle Scholar
- Yamamoto S, Yano H, Sanou O, Ikegami H, Kurimoto M, Kojiro M: Different antiviral activities of IFN-alpha subtypes in human liver cell lines: synergism between IFN-alpha2 and IFN-alpha8. Hepatol Res 2002, 24: 99. 10.1016/S1386-6346(02)00020-7View ArticlePubMedGoogle Scholar
- Lohmann V, Korner F, Koch J, Herian U, Theilmann L, Bartenschlager R: Replication of subgenomic hepatitis C virus RNAs in a hepatoma cell line. Science 1999, 285: 110-113. 10.1126/science.285.5424.110View ArticlePubMedGoogle Scholar
- Koyama T, Sakamoto N, Tanabe Y, Nakagawa M, Itsui Y, Takeda Y, Kakinuma S, Sekine Y, Maekawa S, Yanai Y, et al.: Divergent activities of interferon-alpha subtypes against intracellular hepatitis C virus replication. Hepatol Res 2006, 34: 41-49. 10.1016/j.hepres.2005.10.005View ArticlePubMedGoogle Scholar
- Wakita T, Pietschmann T, Kato T, Date T, Miyamoto M, Zhao Z, Murthy K, Habermann A, Krausslich HG, Mizokami M, et al.: Production of infectious hepatitis C virus in tissue culture from a cloned viral genome. Nat Med 2005, 11: 791-796. 10.1038/nm1268PubMed CentralView ArticlePubMedGoogle Scholar
- Fournier C, Duverlie G, Francois C, Schnuriger A, Dedeurwaerder S, Brochot E, Capron D, Wychowski C, Thibault V, Castelain S: A focus reduction neutralization assay for hepatitis C virus neutralizing antibodies. Virol J 2007, 4: 35. 10.1186/1743-422X-4-35PubMed CentralView ArticlePubMedGoogle Scholar
- Castelain S, Descamps V, Thibault V, Francois C, Bonte D, Morel V, Izopet J, Capron D, Zawadzki P, Duverlie G: TaqMan amplification system with an internal positive control for HCV RNA quantitation. J Clin Virol 2004, 31: 227-234. 10.1016/j.jcv.2004.03.009View ArticlePubMedGoogle Scholar
- Steg A, Wang W, Blanquicett C, Grunda JM, Eltoum IA, Wang K, Buchsbaum DJ, Vickers SM, Russo S, Diasio RB, et al.: Multiple gene expression analyses in paraffin-embedded tissues by TaqMan low-density array: Application to hedgehog and Wnt pathway analysis in ovarian endometrioid adenocarcinoma. J Mol Diagn 2006, 8: 76-83. 10.2353/jmoldx.2006.040402PubMed CentralView ArticlePubMedGoogle Scholar
- Fray MD, Mann GE, Charleston B: Validation of an Mx/CAT reporter gene assay for the quantification of bovine type-I interferon. J Immunol Methods 2001, 249: 235-244. 10.1016/S0022-1759(00)00359-8View ArticlePubMedGoogle Scholar
- Der SD, Zhou A, Williams BR, Silverman RH: Identification of genes differentially regulated by interferon alpha, beta, or gamma using oligonucleotide arrays. Proc Natl Acad Sci USA 1998, 95: 15623-15628. 10.1073/pnas.95.26.15623PubMed CentralView ArticlePubMedGoogle Scholar
- Bieche I, Asselah T, Laurendeau I, Vidaud D, Degot C, Paradis V, Bedossa P, Valla DC, Marcellin P, Vidaud M: Molecular profiling of early stage liver fibrosis in patients with chronic hepatitis C virus infection. Virology 2005, 332: 130-144. 10.1016/j.virol.2004.11.009View ArticlePubMedGoogle Scholar
- Budhu A, Chen Y, Kim JW, Forgues M, Valerie K, Harris CC, Wang XW: Induction of a unique gene expression profile in primary human hepatocytes by hepatitis C virus core, NS3 and NS5A proteins. Carcinogenesis 2007, 28: 1552-1560. 10.1093/carcin/bgm075View ArticlePubMedGoogle Scholar
- Brochot E, Duverlie G, Castelain S, Morel V, Wychowski C, Dubuisson J, Francois C: Effect of ribavirin on the hepatitis C virus (JFH-1) and its correlation with interferon sensitivity. Antivir Ther 2007, 12: 805-813.PubMedGoogle Scholar
- Escuret V, Martin A, Durantel D, Parent R, Hantz O, Trepo C, Menguy T, Bottius E, Dardy J, Maral J, et al.: Novel alpha interferon (IFN-alpha) variant with improved inhibitory activity against hepatitis C virus genotype 1 replication compared to IFN-alpha2b therapy in a subgenomic replicon system. Antimicrob Agents Chemother 2006, 50: 3984-3991. 10.1128/AAC.00199-06PubMed CentralView ArticlePubMedGoogle Scholar
- Jaitin DA, Roisman LC, Jaks E, Gavutis M, Piehler J, Heyden J, Uze G, Schreiber G: Inquiring into the differential action of interferons (IFNs): an IFN-alpha2 mutant with enhanced affinity to IFNAR1 is functionally similar to IFN-beta. Mol Cell Biol 2006, 26: 1888-1897. 10.1128/MCB.26.5.1888-1897.2006PubMed CentralView ArticlePubMedGoogle Scholar
- Piehler J, Roisman LC, Schreiber G: New structural and functional aspects of the type I interferon-receptor interaction revealed by comprehensive mutational analysis of the binding interface. J Biol Chem 2000, 275: 40425-40433. 10.1074/jbc.M006854200View ArticlePubMedGoogle Scholar
- Roisman LC, Jaitin DA, Baker DP, Schreiber G: Mutational analysis of the IFNAR1 binding site on IFNalpha2 reveals the architecture of a weak ligand-receptor binding-site. J Mol Biol 2005, 353: 271-281. 10.1016/j.jmb.2005.08.042View ArticlePubMedGoogle Scholar
- Kumaran J, Wei L, Kotra LP, Fish EN: A structural basis for interferon-alpha-receptor interactions. Faseb J 2007, 21: 3288-3296. 10.1096/fj.07-8585comView ArticlePubMedGoogle Scholar
- Slutzki M, Jaitin DA, Yehezkel TB, Schreiber G: Variations in the unstructured C-terminal tail of interferons contribute to differential receptor binding and biological activity. J Mol Biol 2006, 360: 1019-1030. 10.1016/j.jmb.2006.05.069View ArticlePubMedGoogle Scholar
- van Boxel-Dezaire AH, Rani MR, Stark GR: Complex modulation of cell type-specific signaling in response to type I interferons. Immunity 2006, 25: 361-372. 10.1016/j.immuni.2006.08.014View ArticlePubMedGoogle Scholar
- Francois C, Bernard I, Castelain S, Charleston B, Fray MD, Capiod JC, Duverlie G: Quantification of different human alpha interferon subtypes and pegylated interferon activities by measuring MxA promoter activation. Antimicrob Agents Chemother 2005, 49: 3770-3775. 10.1128/AAC.49.9.3770-3775.2005PubMed CentralView ArticlePubMedGoogle Scholar
- Pavlovic J, Zurcher T, Haller O, Staeheli P: Resistance to influenza virus and vesicular stomatitis virus conferred by expression of human MxA protein. J Virol 1990, 64: 3370-3375.PubMed CentralPubMedGoogle Scholar
- Meurs EF, Watanabe Y, Kadereit S, Barber GN, Katze MG, Chong K, Williams BR, Hovanessian AG: Constitutive expression of human double-stranded RNA-activated p68 kinase in murine cells mediates phosphorylation of eukaryotic initiation factor 2 and partial resistance to encephalomyocarditis virus growth. J Virol 1992, 66: 5805-5814.PubMed CentralPubMedGoogle Scholar
- Coccia EM, Romeo G, Nissim A, Marziali G, Albertini R, Affabris E, Battistini A, Fiorucci G, Orsatti R, Rossi GB, et al.: A full-length murine 2-5A synthetase cDNA transfected in NIH-3T3 cells impairs EMCV but not VSV replication. Virology 1990, 179: 228-233. 10.1016/0042-6822(90)90292-YView ArticlePubMedGoogle Scholar
- Meurs EF, Breiman A: The interferon inducing pathways and the hepatitis C virus. World J Gastroenterol 2007, 13: 2446-2454.PubMed CentralView ArticlePubMedGoogle Scholar
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