Rejeb I, Pastor V, Mauch-Mani B. Plant responses to simultaneous biotic and abiotic stress: molecular mechanisms. Plants. 2014;3:458–75.
Article
PubMed
PubMed Central
Google Scholar
Suzuki N, Rivero RM, Shulaev V, Blumwald E, Mittler R. Abiotic and biotic stress combinations. New Phytol. 2014;203:32–43.
Article
PubMed
Google Scholar
Atkinson NJ, Urwin PE. The interaction of plant biotic and abiotic stresses: From genes to the field. J Exp Bot. 2012;63:3523–43.
Article
PubMed
CAS
Google Scholar
Jones RAC. Global plant virus disease pandemics and epidemics. Plants. 2021;10:233.
Article
PubMed
PubMed Central
CAS
Google Scholar
Akhter MS, Akanda AM, Kobayashi K, Jain RK, Mandal B. Plant virus diseases and their management in Bangladesh. Crop Prot. 2019;118:57–65.
Article
Google Scholar
Maule AJ, Caranta C, Boulton MI. Sources of natural resistance to plant viruses: status and prospects. Mol Plant Pathol. 2007;8:223–31.
Article
PubMed
CAS
Google Scholar
Kang BC, Yeam I, Jahn MM. Genetics of plant virus resistance. Annu Rev Phytopathol. 2005;43:581–621.
Article
PubMed
CAS
Google Scholar
Whitham S, Dinesh-Kumar SP, Choi D, Hehl R, Corr C, Baker B. The product of the tobacco mosaic virus resistance gene N: similarity to toll and the interleukin-1 receptor. Cell. 1994;78:1101–15.
Article
PubMed
CAS
Google Scholar
Dinesh-Kumar SP, Tham WH, Baker BJ. Structure-function analysis of the tobacco mosaic virus resistance gene N. Proc Natl Acad Sci USA. 2000;97:14789–14789.
Article
PubMed
PubMed Central
CAS
Google Scholar
Verberne MC, Hoekstra J, Bol JF, Linthorst HJM. Signaling of systemic acquired resistance in tobacco depends on ethylene perception. Plant J. 2003;35:27–32.
Article
PubMed
CAS
Google Scholar
Jones JDG, Dangl JL. The plant immune system. Nature. 2006;444:323–9.
Article
PubMed
CAS
Google Scholar
Dangl JL, Jones JDG. Plant pathogens and integrated defence responses to infection. Nature. 2001;411:826–33.
Article
PubMed
CAS
Google Scholar
Van Der Hoorn RAL, Kamoun S. From guard to decoy: a new model for perception of plant pathogen effectors. Plant Cell. 2008;20:2009–17.
Article
PubMed
PubMed Central
CAS
Google Scholar
Tena G, Boudsocq M, Sheen J. Protein kinase signaling networks in plant innate immunity. Curr Opin Plant Biol. 2011;14:519–29.
Article
PubMed
PubMed Central
CAS
Google Scholar
Nakahara KS, Masuta C. Interaction between viral RNA silencing suppressors and host factors in plant immunity. Curr Opin Plant Biol. 2014;20:88–95.
Article
PubMed
CAS
Google Scholar
Kang SH, Qu F, Morris TJ. A spectrum of HRT-dependent hypersensitive responses elicited by the 52 amino acid N-terminus of turnip crinkle virus capsid protein and its mutants. Virus Res. 2015;200:30–4.
Article
PubMed
CAS
Google Scholar
Takahashi H, Shoji H, Ando S, Kanayama Y, Kusano T, Takeshita M, et al. RCY1-mediated resistance to Cucumber mosaic virus is regulated by LRR domain-mediated interaction with CMV(Y) following degradation of RCY1. Mol Plant Microbe Interact. 2012;9:1171–85.
Article
CAS
Google Scholar
Yamaji Y, Maejima K, Ozeki J, Komatsu K, Shiraishi T, Okano Y, et al. Lectin-mediated resistance impairs plant virus infection at the cellular level. Plant Cell. 2012;24:778–93.
Article
PubMed
PubMed Central
CAS
Google Scholar
Yoshida T, Shiraishi T, Hagiwara KY, Komatsu K, Maejima K, Okano Y, et al. The plant noncanonical antiviral resistance protein JAX1 inhibits potexviral replication by targeting the viral RNA-dependent RNA polymerase. J Virol. 2019;93:e01506-e1518.
Article
PubMed
PubMed Central
Google Scholar
Cosson P, Sofer L, Le QH, Leger V, Schurdi-Levraud V, Whitham SA, et al. RTM3, which controls long-distance movement of potyviruses, is a member of a new plant gene family encoding a meprin and TRAF homology domain-containing protein. Plant Physiol. 2010;154:222–32.
Article
PubMed
PubMed Central
CAS
Google Scholar
Adhab M, Angel C, Leisner S, Schoelz JE. The P1 gene of Cauliflower mosaic virus is responsible for breaking resistance in Arabidopsis thaliana ecotype. Virology. 2018;523:15–21.
Article
PubMed
CAS
Google Scholar
Ma J, Hou X, Xiao D, Qi L, Wang F, Sun F, et al. Cloning and characterization of the BcTuR3 gene related to resistance to turnip mosaic virus (TuMV) from non-heading Chinese cabbage. Plant Mol Biol Rep. 2010;28:588–96.
Article
CAS
Google Scholar
Jin M, Lee SS, Ke L, Kim JS, Seo MS, Sohn SH, et al. Identification and mapping of a novel dominant resistance gene, TuRB07 to Turnip mosaic virus in Brassica rapa. Theor Appl Genet. 2014;127:509–19.
Article
PubMed
CAS
Google Scholar
Tomita R, Sekine KT, Mizumoto H, Sakamoto M, Murai J, Kiba A, et al. Genetic basis for the hierarchical interaction between Tobamovirus spp. and L resistance gene alleles from different pepper species e-Xtra. Mol Plant Microbe Interact. 2011;24:108–17.
Article
PubMed
CAS
Google Scholar
Brotman Y, Normantovich M, Goldenberg Z, Zvirin Z, Kovalski I, Stovbun N. Dual resistance of melon to Fusarium oxysporum races 0 and 2 and to Papaya ring-spot virus is controlled by a pair of head-to-head-oriented NB-LRR genes of unusual architecture. Mol Plant. 2013;6:235–8.
Article
PubMed
CAS
Google Scholar
Kim SB, Lee HY, Seo S, Lee JH, Choi D. RNA-dependent RNA polymerase (NIb) of the potyviruses is an avirulence factor for the broad-spectrum resistance gene Pvr4 in Capsicum annuum cv. CM334. PLoS ONE. 2015;10:e0119639.
Article
PubMed
PubMed Central
CAS
Google Scholar
Agrofoglio YC, Delfosse VC, Casse MF, Hopp HE, Bonacic Kresic I, Ziegler-Graff V, et al. P0 protein of cotton leafroll dwarf virus-atypical isolate is a weak RNA silencing suppressor and the avirulence determinant that breaks the cotton Cbd gene-based resistance. Plant Pathol. 2019;68:1059–71.
Article
CAS
Google Scholar
Wang K, Der Empleo R, Nguyen TTV, Moffett P, Sacco MA. Elicitation of hypersensitive responses in Nicotiana glutinosa by the suppressor of RNA silencing protein P0 from poleroviruses. Mol Plant Pathol. 2015;16:435–48.
Article
PubMed
CAS
Google Scholar
Butterbach P, Verlaan MG, Dullemans A, Lohuis D, Visser RGF, Bai Y, et al. Tomato yellow leaf curl virus resistance by Ty-1 involves increased cytosine methylation of viral genomes and is compromised by cucumber mosaic virus infection. Proc Natl Acad Sci USA. 2014;111:12942–7.
Article
PubMed
PubMed Central
CAS
Google Scholar
Shen X, Yan Z, Wang X, Wang Y, Arens M, Du Y, et al. The NLR protein encoded by the resistance gene Ty-2 is triggered by the replication-associated protein Rep/C1 of tomato yellow leaf curl virus. Front Plant Sci. 2020;11:545306.
Article
PubMed
PubMed Central
Google Scholar
Zhu M, Jiang L, Bai B, Zhao W, Chen X, Li J, et al. The intracellular immune receptor Sw-5b confers broad-spectrum resistance to tospoviruses through recognition of a conserved 21-amino acid viral effector epitope. Plant Cell. 2017;29:2214–32.
Article
PubMed
PubMed Central
CAS
Google Scholar
Huang C, Liu Y, Yu H, Yuan C, Zeng J, Zhao L, et al. Non-structural protein NSm of tomato spotted wilt virus is an avirulence factor recognized by resistance genes of tobacco and tomato via different elicitor active sites. Viruses. 2018;10:660.
Article
PubMed Central
CAS
Google Scholar
Richard MMS, Knip M, Schachtschabel J, Beijaert MS, Takken FLW. Perturbation of nuclear-cytosolic shuttling of Rx1 compromises extreme resistance and translational arrest of potato virus X transcripts. Plant J. 2021;106:468–79.
Article
PubMed
PubMed Central
CAS
Google Scholar
Grech-Baran M, Witek K, Szajko K, Witek AI, Morgiewicz K, Wasilewicz-Flis I, et al. Extreme resistance to Potato virus Y in potato carrying the Rysto gene is mediated by a TIR-NLR immune receptor. Plant Biotechnol J. 2020;18:655–67.
Article
PubMed
CAS
Google Scholar
Maiti S, Paul S, Pal A. Isolation, characterization, and structure analysis of a non-TIR-NBS-LRR encoding candidate gene from MYMIV-resistant Vigna mungo. Mol Biotechnol. 2012;52:217–33.
Article
PubMed
CAS
Google Scholar
Robaglia C, Caranta C. Translation initiation factors: a weak link in plant RNA virus infection. Trends Plant Sci. 2006;11:40–5.
Article
PubMed
CAS
Google Scholar
Hashimoto M, Neriya Y, Yamaji Y, Namba S. Recessive resistance to plant viruses: potential resistance genes beyond translation initiation factors. Front Microbiol. 2016;7:1695.
Article
PubMed
PubMed Central
Google Scholar
Feng X, Myers JR, Karasev AV. Bean common mosaic virus isolate exhibits a novel pathogenicity profile in common bean, overcoming the bc-3 resistance allele coding for the mutated eIF4E translation initiation factor. Phytopathology. 2015;105:1487–95.
Article
PubMed
CAS
Google Scholar
Choi SH, Nakahara KS, Andrade M, Uyeda I. Characterization of the recessive resistance gene cyv1 of Pisum sativum against Clover yellow vein virus. J Gen Plant Pathol. 2012;78:269–76.
Article
Google Scholar
Perez K, Yeam I, Kang BC, Ripoll DR, Kim J, Murphy JF, et al. Tobacco etch virus infectivity in Capsicum spp. is determined by a maximum of three amino acids in the viral virulence determinant VPg. Mol Plant Microbe Interact. 2012;25:1562–73.
Article
PubMed
CAS
Google Scholar
Orjuela J, Deless EF, Kolade O, Cheron S, Ghesquiere A, Albar L. A recessive resistance to Rice yellow mottle virus is associated with a rice homolog of the CPR5 gene, a regulator of active defense mechanisms. Mol Plant Microbe Interact. 2013;26:1455–6143.
Article
PubMed
CAS
Google Scholar
Naderpour M, Lund OS, Larsen R, Johansen E. Potyviral resistance derived from cultivars of Phaseolus vulgaris carrying bc-3 is associated with the homozygotic presence of a mutated eIF4E allele. Mol Plant Pathol. 2010;11:255–63.
Article
PubMed
CAS
Google Scholar
Yang P, Perovic D, Habekuss A, Zhou RN, Graner A, Ordon F, et al. Gene-based high-density mapping of the gene rym7 conferring resistance to Barley mild mosaic virus (BaMMV). Mol Breed. 2013;32:27–37.
Article
CAS
Google Scholar
Shopan J, Mou H, Zhang L, Zhang C, Ma W, Walsh JA, et al. Eukaryotic translation initiation factor 2B-beta (eIF2Bβ), a new class of plant virus resistance gene. Plant J. 2017;90:929–40.
Article
PubMed
CAS
Google Scholar
Keima T, Hagiwara-Komoda Y, Hashimoto M, Neriya Y, Koinuma H, et al. Deficiency of the eIF4E isoform nCBP limits the cell-to-cell movement of a plant virus encoding triple-gene-block proteins in Arabidopsis thaliana. Sci Rep. 2017;7:1–13.
Article
CAS
Google Scholar
Gomez MA, Lin ZD, Moll T, Chauhan RD, Hayden L, Renninger K, et al. Simultaneous CRISPR/Cas9-mediated editing of cassava eIF4E isoforms nCBP-1 and nCBP-2 reduces cassava brown streak disease symptom severity and incidence. Plant Biotechnol J. 2019;17:421–34.
Article
PubMed
CAS
Google Scholar
Ruyi R, Qiang Z, Futai N, Qiu J, Xiuqing W, Jicheng W. Breeding for PVY resistance in tobacco LJ911 using CRISPR/Cas9 technology. Crop Breed Appl Biotechnol. 2021;21:31682116.
Article
Google Scholar
Kumar S, Dubey AK, Karmakar R, Kini KR, Mathew MK, Prakash HS. Inhibition of TMV multiplication by siRNA constructs against TOM1 and TOM3 genes of Capsicum annuum. J Virol Methods. 2012;186:78–85.
Article
PubMed
CAS
Google Scholar
Koeda S, Onouchi M, Mori N, Pohan NS, Nagano AJ, Kesumawati E. A recessive gene pepy-1 encoding Pelota confers resistance to begomovirus isolates of PepYLCIV and PepYLCAV in Capsicum annuum. Theor Appl Genet. 2021;134:2947–64.
Article
PubMed
CAS
Google Scholar
Nishikiori M, Mori M, Dohi K, Okamura H, Katoh E, Naito S, et al. A host small GTP-binding protein ARL8 plays crucial roles in tobamovirus RNA replication. PLoS Pathog. 2011;7:e1002409.
Article
PubMed
PubMed Central
CAS
Google Scholar
Castelló MJ, Carrasco JL, Vera P. DNA-binding protein phosphatase AtDBP1 mediates susceptibility to two potyviruses in Arabidopsis. Plant Physiol. 2010;153:1521–5.
Article
PubMed
PubMed Central
Google Scholar
Ouibrahim L, Mazier M, Estevan J, Pagny G, Decroocq V, Desbiez C, et al. Cloning of the Arabidopsis rwm1 gene for resistance to Watermelon mosaic virus points to a new function for natural virus resistance genes. Plant J. 2014;79:705–16.
Article
PubMed
CAS
Google Scholar
Poque S, Pagny G, Ouibrahim L, Chague A, Eyquard JP, Caballero M, et al. Allelic variation at the rpv1 locus controls partial resistance to Plum pox virus infection in Arabidopsis thaliana. BMC Plant Biol. 2015;15:159.
Article
PubMed
PubMed Central
CAS
Google Scholar
Hashimoto M, Neriya Y, Keima T, Iwabuchi N, Koinuma H, Hagiwara KY, et al. EXA1, a GYF domain protein, is responsible for loss-of-susceptibility to plantago asiatica mosaic virus in Arabidopsis thaliana. Plant J. 2016;88:1120–31.
Article
CAS
Google Scholar
Dunoyer P, Thomas C, Harrison S, Revers F, Maule A. A cysteine-rich plant protein potentiates Potyvirus movement through an interaction with the virus genome-linked protein VPg. J Virol. 2004;78:2301–9.
Article
PubMed
PubMed Central
CAS
Google Scholar
Amari K, Boutant E, Hofmann C, Schmitt-Keichinger C, Fernandez-Calvino L, Didier P, et al. A family of plasmodesmal proteins with receptor-like properties for plant viral movement proteins. PLoS Pathog. 2010;6:e1001119.
Article
PubMed
PubMed Central
CAS
Google Scholar
Vijayapalani P, Maeshima M, Nagasaki-Takekuchi N, Miller WA. Interaction of the trans-frame potyvirus protein P3N-PIPO with host protein PCaP1 facilitates potyvirus movement. PLoS Pathog. 2012;8:e1002639.
Article
PubMed
PubMed Central
CAS
Google Scholar
Lewis JD, Lazarowitz SG. Arabidopsis synaptotagmin SYTA regulates endocytosis and virus movement protein cell-to-cell transport. Proc Natl Acad Sci USA. 2010;107:2491–6.
Article
PubMed
PubMed Central
Google Scholar
Uchiyama A, Shimada-Beltran H, Levy A, Zheng JY, Javia PA, Lazarowitz SG. The Arabidopsis synaptotagmin SYTA regulates the cell-to-cell movement of diverse plant viruses. Front Plant Sci. 2014;5:584.
Article
PubMed
PubMed Central
Google Scholar
Jiang S, Lu Y, Li K, Lin L, Zheng H, Yan F, et al. Heat shock protein 70 is necessary for Rice stripe virus infection in plants. Mol Plant Pathol. 2014;15:907–17.
Article
PubMed
PubMed Central
CAS
Google Scholar
Feng Z, Xue F, Xu M, Chen X, Zhao W, Garcia-Murria MJ, et al. The ER-membrane transport system is critical for intercellular trafficking of the NSm movement protein and tomato spotted wilt tospovirus. PLoS Pathog. 2016;12:e1005443.
Article
PubMed
PubMed Central
CAS
Google Scholar
Yang P, Lupken T, Habekuss A, Hensel G, Steuernagel B, Kilian B, et al. PROTEIN DISULFIDE ISOMERASE LIKE 5–1 is a susceptibility factor to plant viruses. Proc Natl Acad Sci USA. 2014;111:2104–9.
Article
PubMed
PubMed Central
CAS
Google Scholar
Zhang L, Chen H, Brandizzi F, Verchot J, Wang A. The UPR branch IRE1-bZIP60 in plants plays an essential role in viral infection and is complementary to the only UPR pathway in yeast. PLoS Genet. 2015;11:e1005164.
Article
PubMed
PubMed Central
CAS
Google Scholar
Ye C, Dickman MB, Whitham SA, Payton M, Verchot J. The unfolded protein response is triggered by a plant viral movement protein. Plant Physiol. 2011;156:741–55.
Article
PubMed
PubMed Central
CAS
Google Scholar
Zou LJ, Deng XG, Han XY, Tan WR, Zhu LJ, Xi DH, et al. Role of transcription factor HAT1 in modulating Arabidopsis thaliana response to Cucumber mosaic virus. Plant Cell Physiol. 2016;57:1879–89.
Article
PubMed
CAS
Google Scholar
Ketzinel-Gilad M, Shaul Y, Galun E. RNA interference for antiviral therapy. J Gene Med. 2006;8:933–50.
Article
PubMed
PubMed Central
CAS
Google Scholar
Voinnet O. RNA silencing as a plant immune system against viruses. Trends Genet. 2001;17:449–59.
Article
PubMed
CAS
Google Scholar
Gomes LC, Dikic I. Autophagy in antimicrobial immunity. Mol Cell. 2014;54:224–33.
Article
PubMed
CAS
Google Scholar
Luo H. Interplay between the virus and the ubiquitin-proteasome system: molecular mechanism of viral pathogenesis. Curr Opin Virol. 2016;17:1–10.
Article
PubMed
CAS
Google Scholar
Nakahara KS, Masuta C, Yamada S, Shimura H, Kashihara Y, Wada TS, et al. Tobacco calmodulin-like protein provides secondary defense by binding to and directing degradation of virus RNA silencing suppressors. Proc Natl Acad Sci USA. 2012;109:10113–8.
Article
PubMed
PubMed Central
Google Scholar
Jeon EJ, Tadamura K, Murakami T, Inaba J, Kim BM, Sato M, et al. rgs-CaM detects and counteracts viral RNA silencing suppressors in plant immune priming. J Virol. 2017;91:e00761-e817.
Article
PubMed
PubMed Central
CAS
Google Scholar
Miyashita Y, Atsumi G, Nakahara KS. Trade-offs for viruses in overcoming innate immunities in plants. Mol Plant Microbe Interact. 2016;29:595–8.
Article
PubMed
CAS
Google Scholar
Dangl JL, Dietrich RA, Richberg MH. Death don’t have no mercy: Cell death programs in plant–microbe interactions. Plant Cell. 1996;8:1793–807.
Article
PubMed
PubMed Central
CAS
Google Scholar
Hammond-Kosack KE, Jones JD. Resistance gene-dependent plant defense responses. Plant Cell. 1996;8:1773–91.
PubMed
PubMed Central
CAS
Google Scholar
Richberg MH, Aviv DH, Dangl JL. Dead cells do tell tales. Curr Opin Plant Biol. 1998;1:480–5.
Article
PubMed
CAS
Google Scholar
Yang KY, Liu Y, Zhang S. Activation of a mitogen-activated protein kinase pathway is involved in disease resistance in tobacco. Proc Natl Acad Sci USA. 2001;98:741–6.
Article
PubMed
PubMed Central
CAS
Google Scholar
Meyers BC, Kozik A, Griego A, Kuang H, Michelmore RW. Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis. Plant Cell. 2003;15:809–34.
Article
PubMed
PubMed Central
CAS
Google Scholar
Collier SM, Moffett P. NB-LRRs work a “bait and switch” on pathogens. Trends in Plant Science. Trends Plant Sci. 2009;14:521–9.
Article
PubMed
CAS
Google Scholar
Moffett P. Mechanisms of recognition in dominant R gene mediated resistance. Adv Virus Res. 2009;75:1–33.
Article
PubMed
CAS
Google Scholar
Rairdan GJ, Moffett P. Distinct domains in the ARC region of the potato resistance protein Rx mediate LRR binding and inhibition of activation. Plant Cell. 2006;18:2082–93.
Article
PubMed
PubMed Central
CAS
Google Scholar
Rairdan GJ, Collier SM, Sacco MA, Baldwin TT, Boettrich T, Moffett P. The coiled-coil and nucleotide binding domains of the potato Rx disease resistance protein function in pathogen recognition and signaling. Plant Cell. 2008;20:739–51.
Article
PubMed
PubMed Central
CAS
Google Scholar
Grishok A, Pasquinelli AE, Conte D, Li N, Parrish S, Ha I, et al. Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing. Cell. 2001;106:23–34.
Article
PubMed
CAS
Google Scholar
Hammond SM, Caudy AA, Hannon GJ. Post-transcriptional gene silencing by double-stranded RNA. Nat Rev Genet. 2001;2:110–9.
Article
PubMed
CAS
Google Scholar
Wang MB, Masuta C, Smith NA, Shimura H. RNA silencing and plant viral diseases. Mol Plant Microbe Interact. 2012;25:1275–85.
Article
PubMed
CAS
Google Scholar
Zhou R, Rana TM. RNA-based mechanisms regulating host-virus interactions. Immunol Rev. 2013;253:97–111.
Article
PubMed
PubMed Central
CAS
Google Scholar
Marathe R, Anandalakshmi R, Smith TH, Pruss GJ, Vance VB. RNA viruses as inducers, suppressors and targets of post-transcriptional gene silencing. Plant Mol Biol. 2000;43:295–306.
Article
PubMed
CAS
Google Scholar
Ding SW, Voinnet O. Antiviral immunity directed by small RNAs. Cell. 2007;130:413–26.
Article
PubMed
PubMed Central
CAS
Google Scholar
Pumplin N, Voinnet O. RNA silencing suppression by plant pathogens: defence, counter-defence and counter-counter-defence. Nat Rev Microbiol. 2013;11:745–60.
Article
PubMed
CAS
Google Scholar
Teixeira RM, Ferreira MA, Raimundo GAS, Fontes EPB. Geminiviral triggers and suppressors of plant antiviral immunity. Microorganisms. 2021;9:775.
Article
PubMed
PubMed Central
Google Scholar
Burgyán J, Havelda Z. Viral suppressors of RNA silencing. Trends Plant Sci. 2011;16:265–72.
Article
PubMed
CAS
Google Scholar
Kim H, Shimura H, Masuta C. Advancing toward commercial application of RNA silencing-based strategies to protect plants from viral diseases. J Gen Plant Pathol. 2019;85:321–8.
Article
CAS
Google Scholar
Tripathi S, Suzuki JY, Ferreira SA, Gonsalves D. Papaya ringspot virus-P: characteristics, pathogenicity, sequence variability and control. Mol Plant Pathol. 2008;9:269–80.
Article
PubMed
PubMed Central
CAS
Google Scholar
Konakalla NC, Bag S, Deraniyagala AS, Culbreath AK, Pappu HR. Induction of plant resistance in tobacco (Nicotiana tabacum) against tomato spotted wilt orthotospovirus through foliar application of dsRNA. Viruses. 2021;13:662.
Article
PubMed
PubMed Central
CAS
Google Scholar
Truniger V, Aranda MA. Recessive resistance to plant viruses. Adv Virus Res. 2009;75:119–59.
Article
PubMed
CAS
Google Scholar
Schaad MC, Anderberg RJ, Carrington JC. Strain-specific interaction of the tobacco etch virus Nla protein with the translation initiation factor elF4E in the yeast two-hybrid system. Virology. 2000;273:300–6.
Article
PubMed
CAS
Google Scholar
Yeam I, Cavatorta JR, Ripoll DR, Kang BC, Jahn MM. Functional dissection of naturally occurring amino acid substitutions in eIF4E that confers recessive potyvirus resistance in plants. Plant Cell. 2007;19:2913–28.
Article
PubMed
PubMed Central
CAS
Google Scholar
Cavatorta JR, Savage AE, Yeam I, Gray SM, Jahn MM. Positive Darwinian selection at single amino acid sites conferring plant virus resistance. J Mol Evol. 2008;67:551–9.
Article
PubMed
CAS
Google Scholar
Bastet A, Robaglia C, Gallois JL. eIF4E resistance: Natural variation should guide gene editing. Trends Plant Sci. 2017;22:411–9.
Article
PubMed
CAS
Google Scholar
Sato M, Nakahara K, Yoshii M, Ishikawa M, Uyeda I. Selective involvement of members of the eukaryotic initiation factor 4E family in the infection of Arabidopsis thaliana by potyviruses. FEBS Lett. 2005;579:1167–71.
Article
PubMed
CAS
Google Scholar
Bastet A, Zafirov D, Giovinazzo N, Guyon-Debast A, Nogué F, Robaglia C, et al. Mimicking natural polymorphism in eIF4E by CRISPR-Cas9 base editing is associated with resistance to potyviruses. Plant Biotechnol J. 2019;17:1736–50.
Article
PubMed
PubMed Central
CAS
Google Scholar
Atarashi H, Kwon J, Jayasinghe WH, Kim H, Taninaka Y, Igarashi M, et al. Artificially edited alleles of the eukaryotic translation initiation factor 4E1 gene differentially reduce susceptibility to cucumber mosaic virus and potato virus Y in tomato. Front Microbiol. 2020;11:564310.
Article
PubMed
PubMed Central
Google Scholar
Gauffier C, Lebaron C, Moretti A, Constant C, Moquet F, Bonnet G, et al. A TILLING approach to generate broad-spectrum resistance to potyviruses in tomato is hampered by eIF4E gene redundancy. Plant J. 2016;85:717–29.
Article
PubMed
CAS
Google Scholar
Piron F, Nicolaï M, Minoïa S, Piednoir E, Moretti A, Salgues A, et al. An induced mutation in tomato eiF4E leads to immunity to two potyviruses. PLoS ONE. 2010;5:e11313.
Article
PubMed
PubMed Central
CAS
Google Scholar
Panavas T, Serviene E, Brasher J, Nagy PD. Yeast genome-wide screen reveals dissimilar sets of host genes affecting replication of RNA viruses. Proc Natl Acad Sci USA. 2005;102:7326–31.
Article
PubMed
PubMed Central
CAS
Google Scholar
Ishikawa M, Díez J, Restrepo-Hartwig M, Ahlquist P. Yeast mutations in multiple complementation groups inhibit brome mosaic virus RNA replication and transcription and perturb regulated expression of the viral polymerase-like gene. Proc Natl Acad Sci USA. 1997;94:13810–5.
Article
PubMed
PubMed Central
CAS
Google Scholar
Ivanov KI, Eskelin K, Basic M, De S, Lohmus A, Varjosalo M, et al. Molecular insights into the function of the viral RNA silencing suppressor HCPro. Plant J. 2016;85:30–45.
Article
PubMed
CAS
Google Scholar
Pollari M, De S, Wang A, Makinen K. The potyviral silencing suppressor HCPro recruits and employs host ARGONAUTE1 in pro-viral functions. PLoS Pathog 2020;16:e1008965.
Article
PubMed
PubMed Central
CAS
Google Scholar
Rosas-Diaz T, Zhang D, Fan P, Wang L, Ding X, Jiang Y, et al. A virus-targeted plant receptor-like kinase promotes cell-to-cell spread of RNAi. Proc Natl Acad Sci USA. 2018;115:1388–93.
Article
PubMed
PubMed Central
CAS
Google Scholar
Tran PT, Citovsky V. Receptor-like kinase BAM1 facilitates early movement of the Tobacco mosaic virus. Commun Biol. 2021;4:1–11.
Article
CAS
Google Scholar
Anandalakshmi R, Marathe R, Ge X, Herr JM Jr, Mau C, Mallory A, et al. A calmodulin-related protein that suppresses posttranscriptional gene silencing in plants. Science. 2000;290:142–4.
Article
PubMed
CAS
Google Scholar
Tadamura K, Nakahara KS, Masuta C, Uyeda I. Wound-induced rgs-CaM gets ready for counterresponse to an early stage of viral infection. Plant Signal Behav. 2012;7:1548–51.
Article
PubMed
PubMed Central
CAS
Google Scholar
Ying XB, Dong L, Zhu H, Duan CG, Du QS, Lv DQ, et al. RNA-dependent RNA polymerase 1 from Nicotiana tabacum suppresses RNA silencing and enhances viral infection in Nicotiana benthamiana. Plant Cell. 2010;22:1358–72.
Article
PubMed
PubMed Central
CAS
Google Scholar
Katsarou K, Mavrothalassiti E, Dermauw W, van Leeuwen T, Kalantidis K. Combined activity of DCL2 and DCL3 is crucial in the defense against potato spindle tuber viroid. PLoS Pathog. 2016;12:1–24.
Article
CAS
Google Scholar
Zafirov D, Giovinazzo N, Bastet A, Gallois JL. When a knockout is an Achilles’ heel: Resistance to one potyvirus species triggers hypersusceptibility to another one in Arabidopsis thaliana. Mol Plant Pathol. 2021;22:334–47.
Article
PubMed
CAS
Google Scholar
Clavel M, Michaeli S, Genschik P. Autophagy: a double-edged sword to fight plant viruses. Trends Plant Sci. 2017;22:646–8.
Article
PubMed
CAS
Google Scholar
Yang M, Ismayil A, Liu Y. Autophagy in plant–virus interactions. Annu Rev Virol. 2020;7:403–19.
Article
PubMed
CAS
Google Scholar
Kushwaha NK, Hafren A, Hofius D. Autophagy-virus interplay in plants: from antiviral recognition to proviral manipulation. Mol Plant Pathol. 2019;20:1211–6.
Article
PubMed
PubMed Central
Google Scholar
Faoro F, Gozzo F. Is modulating virus virulence by induced systemic resistance realistic? Plant Sci. 2015;234:1–13.
Article
PubMed
CAS
Google Scholar
Alazem M, Lin NS. Roles of plant hormones in the regulation of host-virus interactions. Mol Plant Pathol. 2015;16:529–40.
Article
PubMed
CAS
Google Scholar
Denance N, Sanchez-Vallet A, Goffner D, Molina A. Disease resistance or growth: the role of plant hormones in balancing immune responses and fitness costs. Front Plant Sci. 2013;4:155.
Article
PubMed
PubMed Central
Google Scholar
Pieterse CM, Leon-Reyes A, Van der Ent S, Van Wees SC. Networking by small molecule hormones in plant immunity. Nat Chem Biol. 2009;5:308–16.
Article
PubMed
CAS
Google Scholar
Santner A, Calderon-Villalobos LI, Estelle M. Plant hormones are versatile chemical regulators of plant growth. Nat Chem Biol. 2009;5:301–7.
Article
PubMed
CAS
Google Scholar
Bari R, Jones J. Role of plant hormones in plant defence responses. Plant Mol Biol. 2009;69:473–88.
Article
PubMed
CAS
Google Scholar
Koornneef A, Pieterse CMJ. Cross talk in defense signaling. Plant Physiol. 2008;146:839–44.
Article
PubMed
PubMed Central
CAS
Google Scholar
Spoel SH, Koornneef A, Claessens SMC, Korzelius JP, Van Pelt JA, Mueller MJ, et al. NPR1 modulates cross-talk between salicylate- and jasmonate- dependent defense pathways through a novel function in the cytosol. Plant Cell. 2003;15:760–70.
Article
PubMed
PubMed Central
CAS
Google Scholar
Yasuda M, Ishikawa A, Jikumaru Y, Seki M, Umezawa T, Asami T, et al. Antagonistic interaction between systemic acquired resistance and the abscisic acid-mediated abiotic stress response in Arabidopsis. Plant Cell. 2008;20:1678–92.
Article
PubMed
PubMed Central
CAS
Google Scholar
Kachroo A, Kachroo P. Salicylic acid, jasmonic acid and ethylene-mediated regulation of plant defense signaling. In: Setlow JK, editor. Genetic engineering: Principles and methods. Springer: US; 2007. p. 55–83.
Chapter
Google Scholar
Alamillo JM, Saenz P, Garcia JA. Salicylic acid-mediated and RNA-silencing defense mechanisms cooperate in the restriction of systemic spread of plum pox virus in tobacco. Plant J. 2006;48:217–27.
Article
PubMed
CAS
Google Scholar
Baebler S, Witek K, Petek M, Stare K, Tusek-Znidaric M, Pompe-Novak M, et al. Salicylic acid is an indispensable component of the Ny-1 resistance-gene-mediated response against Potato virus Y infection in potato. J Exp Bot. 2014;65:1095–9.
Article
PubMed
PubMed Central
CAS
Google Scholar
Li T, Huang Y, Xu ZS, Wang F, Xiong AS. Salicylic acid-induced differential resistance to the Tomato yellow leaf curl virus among resistant and susceptible tomato cultivars. BMC Plant Biol. 2019;19:1–14.
Article
Google Scholar
Matsuo Y, Novianti F, Takehara M, Fukuhara T, Arie T, Komatsu K. Acibenzolar-s-methyl restricts infection of Nicotiana benthamiana by plantago asiatica mosaic virus at two distinct stages. Mol Plant Microbe Interact. 2019;32:1475–86.
Article
PubMed
CAS
Google Scholar
Kobayashi Y, Fukuzawa N, Hyodo A, Kim H, Mashiyama S, Ogihara T, et al. Role of salicylic acid glucosyltransferase in balancing growth and defence for optimum plant fitness. Mol Plant Pathol. 2020;21:429–42.
Article
PubMed
PubMed Central
CAS
Google Scholar
Siegrist J, Orober M, Buchenauer H. β-Aminobutyric acid-mediated enhancement of resistance in tobacco to tobacco mosaic virus depends on the accumulation of salicylic acid. Physiol Mol Plant Pathol. 2000;56:95–106.
Article
CAS
Google Scholar
Nakashita H, Yoshioka K, Yasuda M, Nitta T, Arai Y, Yoshida S, et al. Probenazole induces systemic acquired resistance in tobacco through salicylic acid accumulation. Physiol Mol Plant Pathol. 2002;61:197–203.
Article
CAS
Google Scholar
Deng XG, Zhu T, Peng XJ, Xi DH, Guo H, Yin Y, et al. Role of brassinosteroid signaling in modulating Tobacco mosaic virus resistance in Nicotiana benthamiana. Sci Rep. 2016;6:20579.
Article
PubMed
PubMed Central
CAS
Google Scholar
Hu J, Huang J, Xu H, Wang C, Wen P, You X, et al. Rice stripe virus suppresses jasmonic acid-mediated resistance by hijacking brassinosteroid signaling pathway in rice. PLoS Pathog. 2020;16:e1008801.
Article
PubMed
PubMed Central
CAS
Google Scholar
Tao Y, Yu QX, Zhou YH, Shi K, Zhou J, Yu JQ, et al. Application of 24-epibrassinolide decreases the susceptibility to cucumber mosaic virus in zucchini (Cucurbita pepo L). Sci Hortic. 2015;195:116–23.
Article
CAS
Google Scholar
Gozzo F, Faoro F. Systemic acquired resistance (50 years after discovery): moving from the lab to the field. J Agric Food Chem. 2013;61:12473–91.
Article
PubMed
CAS
Google Scholar
Yan XH, Chen J, Di YT, Fang X, Dong JH, Sang P, et al. Anti-tobacco mosaic virus (TMV) quassinoids from Brucea javanlca (L.) merr. J Agric Food Chem. 2010;58:1572–7.
Article
PubMed
CAS
Google Scholar
Zou J, Zhao L, Yi P, An Q, He L, Li Y, et al. Quinolizidine alkaloids with antiviral and insecticidal activities from the aeeds of Sophora tonkinensis gagnep. J Agric Food Chem. 2020;68:15015–26.
Article
PubMed
CAS
Google Scholar
Li JG, Cao J, Sun FF, Niu DD, Yan F, Liu HX, et al. Control of Tobacco mosaic virus by PopW as a result of induced resistance in tobacco under greenhouse and field conditions. Phytopathology. 2011;101:1202–8.
Article
PubMed
CAS
Google Scholar
Zellner W, Frantz J, Leisner S. Silicon delays Tobacco ringspot virus systemic symptoms in Nicotiana tabacum. J Plant Physiol. 2011;168:1866–9.
Article
PubMed
CAS
Google Scholar
Wang J, Zhu YK, Wang HY, Zhang H, Wang KY. Inhibitory effects of esterified whey protein fractions by inducing chemical defense against tobacco mosaic virus (TMV) in tobacco seedlings. Ind Crops Prod. 2012;37:207–12.
Article
CAS
Google Scholar
Li S, Li Y, Hao X, Li S, He H, Yan X, et al. Eudesmanolides from Wedelia trilobata (L.) Hitchc. as potential inducers of plant systemic acquired resistance. J Agric Food Chem. 2013;61:3884–90.
Article
PubMed
CAS
Google Scholar
Sagor GHM, Liu T, Takahashi T, Niitsu M, Berberich T, Kusano T. Longer uncommon polyamines have a stronger defense gene-induction activity and a higher suppressing activity of Cucumber mosaic virus multiplication compared to that of spermine in Arabidopsis thaliana. Plant Cell Rep. 2013;32:1477–88.
Article
PubMed
CAS
Google Scholar
Song GC, Choi HK, Ryu CM. The folate precursor para-aminobenzoic acid elicits induced resistance against Cucumber mosaic virus and Xanthomonas axonopodis. Ann Bot. 2013;111:925–34.
Article
PubMed
PubMed Central
CAS
Google Scholar
Wang C, Fan Y. Eugenol enhances the resistance of tomato against tomato yellow leaf curl virus. J Sci Food Agric. 2014;94:677–82.
Article
PubMed
CAS
Google Scholar
Han Y, Luo Y, Qin S, Xi L, Wan B, Du L. Induction of systemic resistance against tobacco mosaic virus by Ningnanmycin in tobacco. Pestic Biochem Physiol. 2014;111:14–8.
Article
PubMed
CAS
Google Scholar
Zhu L, Li Y, Ara N, Yang J, Zhang M. Role of a newly cloned alternative oxidase gene (BjAOX1a) in turnip mosaic virus (TuMV) resistance in Mustard. Plant Mol Bio Rep. 2012;30:309–18.
Article
CAS
Google Scholar
Fujiwara A, Togawa S, Hikawa T, Matsuura H, Masuta C, Inukai T. Ascorbic acid accumulates as a defense response to Turnip mosaic virus in resistant Brassica rapa cultivars. J Exp Bot. 2016;67:4391–402.
Article
PubMed
PubMed Central
CAS
Google Scholar
Kong HG, Shin TS, Kim TH, Ryu CM. Stereoisomers of the bacterial volatile compound 2,3-butanediol differently elicit systemic defense responses of pepper against multiple viruses in the field. Front Plant Sci. 2018;9:90.
Article
PubMed
PubMed Central
Google Scholar
Beris D, Theologidis I, Skandalis N, Vassilakos N. Bacillus amyloliquefaciens strain MBI600 induces salicylic acid dependent resistance in tomato plants against Tomato spotted wilt virus and Potato virus Y. Sci Rep. 2020;8:10320.
Article
CAS
Google Scholar
Lee GH, Ryu CM. Spraying of leaf-colonizing Bacillus amyloliquefaciens protects pepper from Cucumber mosaic virus. Plant Dis. 2016;100:2099–105.
Article
PubMed
CAS
Google Scholar
Elsharkawy MM, Shimizu M, Takahashi H, Hyakumachi M. Induction of systemic resistance against Cucumber mosaic virus by Penicillium simplicissimum GP17-2 in Arabidopsis and tobacco. Plant Pathol. 2012;61:964–76.
Article
CAS
Google Scholar
Vitti A, Pellegrini E, Nali CS, Lovelli CS, Sofo A, Valerio M, et al. Trichoderma harzianum T-22 induces systemic resistance in tomato infected by Cucumber mosaic virus. Front Plant Sci. 2016;7:1520.
Article
PubMed
PubMed Central
Google Scholar
Lee G, Lee SH, Kim KM, Ryu CM. Foliar application of the leaf-colonizing yeast Pseudozyma churashimaensis elicits systemic defense of pepper against bacterial and viral pathogens. Sci Rep. 2017;7:39432.
Article
PubMed
PubMed Central
CAS
Google Scholar