- Open Access
Infectious salmon anaemia virus replication and induction of alpha interferon in Atlantic salmon erythrocytes
© Workenhe et al; licensee BioMed Central Ltd. 2008
- Received: 07 January 2008
- Accepted: 28 February 2008
- Published: 28 February 2008
Infectious salmon anaemia (ISA) virus (ISAV), which causes ISA in marine-farmed Atlantic salmon, is an orthomyxovirus belonging to the genus Isavirus, family Orthomyxoviridae. ISAV agglutinates erythrocytes of several fish species and it is generally accepted that the ISAV receptor destroying enzyme dissolves this haemagglutination except for Atlantic salmon erythrocytes. Recent work indicates that ISAV isolates that are able to elute from Atlantic salmon erythrocytes cause low mortality in challenge experiments using Atlantic salmon. Previous work on ISAV-induced haemagglutination using the highly pathogenic ISAV strain NBISA01 and the low pathogenic ISAV strain RPC/NB-04-0851, showed endocytosis of NBISA01 but not RPC/NB-04-0851. Real-time RT-PCR was used to assess the viral RNA levels in the ISAV-induced haemagglutination reaction samples, and we observed a slight increase in viral RNA transcripts by 36 hours in the haemagglutination reaction with NBISA01 virus when the experiment was terminated. However, a longer sampling interval was considered necessary to confirm ISAV replication in fish erythrocytes and to determine if the infected cells mounted any innate immune response. This study examined the possible ISAV replication and Type I interferon (IFN) system gene induction in Atlantic salmon erythrocytes following ISAV haemagglutination.
Haemagglutination assays were performed using Atlantic salmon erythrocytes and one haemagglutination unit of the two ISAV strains, NBISA01 and RPC/NB-04-0851, of differing genotypes and pathogenicities. Haemagglutination induced by the highly pathogenic NBISA01 but not the low pathogenic RPC/NB-04-0851 resulted in productive infection as evidenced by increased ISAV segment 8 transcripts and increase in the median tissue culture infectious dose (TCID50) by 5 days of incubation. Moreover, reverse transcription (RT) quantitative PCR used to compare mRNA levels of key Type I IFN system genes in erythrocyte lysates of haemagglutination reactions with the two ISAV strains showed a higher relative fold increase of IFN-α in NBISA01 haemagglutinations compared to RPC/NB-04-085-1 haemagglutinations (33.0 – 44.26 relative fold increase compared to 11.29). Erythrocytes exposed to heat-inactivated virus or to polyinosinic:polycytidylic acid (polyI:C) or to L-15 medium alone (negative control assays) had minimal late induction (<3.5 relative fold increase) of STAT1 and/or ISG15 and Mx genes, whereas erythrocytes exposed to UV-inactivated virus lacked any cytokine induction.
ISAV-induced haemagglutination by a highly pathogenic virus strain results in virus uptake and productive infection of Atlantic salmon erythrocytes accompanied by significant induction of IFN-α. This study also highlights the critical role of ISAV strain variation in the initial stages of the virus-cell interaction during haemagglutination, and possibly in the pathogenesis of ISA. Moreover, the study shows for the first time that fish erythrocytes immunologically respond to ISAV infection.
- Atlantic Salmon
- Haemagglutination Assay
- Infectious Salmon Anaemia Virus
- Fish Erythrocyte
- Infectious Salmon Anaemia
Infectious salmon anaemia (ISA) is a highly fatal viral disease affecting marine-farmed Atlantic salmon (Salmo salar L). This fish disease is caused by ISA virus (ISAV), a fish orthomyxovirus assigned to the genus Isavirus within the family Orthomyxoviridae . The ISAV strains are enveloped particles of 90–140 nm diameter with surface projections consisting of a combined haemagglutinin-esterase (HE) protein  and a separate fusion (F) protein . The genome is composed of eight segments of linear, single-stranded negative sense RNA ranging in length from 1.0 to 2.4 kb with a total molecular size of approximately 14.3 kb .
The clinical disease caused by ISAV in marine-farmed Atlantic salmon is associated with anaemia , which is hypothesized to be linked with uptake of virus-coated erythrocytes by immune cells . The fish erythrocytes would probably be coated with ISAV through interaction of the cellular sialic acid receptors and the viral HE glycoprotein as occurs during the haemagglutination reaction. ISAV haemagglutination of fish erythrocytes, similar to influenza A virus haemagglutination of avian and mammalian erythrocytes, involves three independent phenomena:  adsorption of viruses at the erythrocyte membrane,  subsequent elution [7–9], which is not always complete, and  uptake of viruses by the erythrocytes [10, 11]. For ISAV, elution from erythrocytes was originally reported to occur with erythrocytes of several fish species except Atlantic salmon  in which the virus causes a natural clinical disease (as reviewed in ). However, recent work indicates that ISAV isolates that are able to elute from Atlantic salmon erythrocytes cause low mortality in challenge experiments using Atlantic salmon . In our previous work on ISAV-induced haemagglutination using the highly pathogenic NBISA01 and the low pathogenic RPC/NB 04-0851, only NBISA01 was taken up by the erythrocytes from Atlantic salmon and rainbow trout (Oncorhynchus mykiss) . In contrast, the uptake of influenza A virus by avian and mammalian erythrocytes via pinocytosis was non-specific  indicating a lack of involvement of virus strain-specific differences such as pathogenicity level. This suggested to us that the lack of dissolution of pathogenic ISAV-induced haemagglutination of Atlantic salmon erythrocytes favours endocytosis of the virus particles by the erythrocytes  and this phenomenon may contribute to the anaemia in ISA.
Members of the family Orthomyxoviridae are known to have a nuclear replication phase . Enucleated BS-C-1 cells have been shown to be non-permissive for replication of influenza A viruses . By inference, mature mammalian erythrocytes, which are enucleated, are also non-permissive for replication of influenza A viruses. In the case of the nucleated avian (turkey or chicken) erythrocytes, haemagglutination by avian influenza A virus resulted only in de novo synthesis of viral proteins but not production of new infectious virus . We previously used real-time RT-PCR to assess the viral RNA levels in the ISAV-induced haemagglutination reaction samples, and observed a slight increase in viral RNA transcripts by 36 hours in the haemagglutination reaction with NBISA01 virus when the experiment was terminated . However, a longer sampling interval was considered necessary to confirm ISAV replication in fish erythrocytes and to determine if the infected cells mounted any innate immune response.
The Type I IFN system constitutes the major antiviral defence mechanism in the innate immune system of mammals as well as fish . Most cell types are able to detect viral replication dsRNA intermediates and respond by secretion of IFN, which then uses the JAK/STAT signalling pathway to stimulate induction of the components of the Type I IFN system genes such as Mx, ISG15 and STAT1 . Atlantic salmon organs and the macrophage-like fish cell line TO  respond to ISAV infection by up-regulating the expression of key Type I IFN system genes . The limited immunological studies on the nucleated fish erythrocytes suggest that they possess a certain level of immune functions; the mature erythrocyte populations of rainbow trout were shown to surround macrophages phagocytosing Candida albicans and to secrete cytokine-like macrophage inhibitory factors . However, there is no report of IFN induction in intact erythrocytes either in fish or avian or mammalian species.
The goal of this study was to determine whether ISAV uptake by fish erythrocytes results in a productive infection and, if so, whether there is any effect of differences in the pathogenicity level of the virus on the cellular response. This information is needed to further clarify the pathogenesis of the clinical disease in fish. In order to obtain information on the putative associated innate immune response in erythrocytes, we used reverse transcription (RT) quantitative PCR assays with SYBR Green chemistry to evaluate mRNA levels of Type I IFN system genes IFN-α, Mx, ISG15, STAT1 and PKZ at regular intervals up to 5 days following virus-induced haemagglutination.
ISAV replicates in Atlantic salmon erythrocytes
Transcript levels of viral genes on ISAV segment 8 in extended haemagglutination assays1
Sampling points in days
One-step RT-PCR with F5/R5 primer pair
RT with oligodT primer & PCR with F5/R5 primer pair
One-step RT-PCR with F5/R5 primer pair
26.57 ± 0.14
22.22 ± 0.05
20.39 ± 0.21
24.43 ± 0.15
20.63 ± 0.05
21.23 ± 0.15
22.25 ± 0.21*
19.40 ± 0.02
20.46 ± 0.26
21.51 ± 0.33*
18.31 ± 0.02*
20.76 ± 0.36
21.04 ± 0.40*
18.67 ± 0.27*
20.27 ± 0.22
20.48 ± 0.29*
19.29 ± 0.12*
20.55 ± 0.29
We examined if the de novo synthesis of viral RNA by NBISA01 in the erythrocytes of Atlantic salmon was accompanied with production of new infectious virus by titrating the haemagglutination reactions on the TO cell line, which is highly permissive for ISAV [18, 22]. For this, the haemagglutination reactions were sampled at 0, 3 and 5 days post-haemagglutination and 10-fold dilutions of each sample were inoculated on TO cell monolayers in quadruplicate. The 0 hour sample showed a TCID50 of 107.0 ± 0.433/ml and day 3 sample showed a TCID50 of 106.92 ± 0.143/ml while the day 5 sample had a TCID50 of 107.75 ± 0.25/ml, demonstrating a 0.75 log10 increase in virus titre by day 5. This indicated a productive infection during ISAV-induced haemagglutination with the highly pathogenic NBISA01 virus. The significant decrease in Ct value in contrast to the small increase in virus titre is attributed to differences in sensitivity between the two assays used here to demonstrate virus replication, and to the limited viral replication possible during the haemagglutination reaction.
ISAV-induced haemagglutination induces IFN-α in fish erythrocytes
PolyI:C stimulated erythrocytes show minimal induction of Type I IFN system genes
Two models of haemagglutination-infection phenotypes have been proposed to account for the anaemia associated with the clinical disease due to ISAV infection in fish. The first model is that anaemia in the clinical disease is due to uptake by immune cells of fish erythrocytes coated with ISAV , and the receptor destroying enzyme (RDE) activity, which is related to the pathogenicity of the virus , allows the virus to elute from fish erythrocytes except those of Atlantic salmon . An alternative model is that failure of ISAV to elute from Atlantic salmon erythrocytes favours virus infection of the erythrocytes, which might result in cell death, and this combination is related to the pathogenicity of the virus . Such a haemagglutination-infection phenotype is fundamentally different from haemagglutination by avian and mammalian orthomyxoviruses, and may be indicative of a different pathogenesis for the fish orthomyxovirus.
In the present study we set up haemagglutination assays in L-15 growth medium to compare two phenomena (elution and uptake) of the ISAV-induced haemagglutination of Atlantic salmon erythrocytes between virus strains of differing pathogenicities. We found remarkable differences in virus replication and quality of cytokine response in the fish erythrocytes. Real-time quantitative RT-PCR was used to assess the viral RNA levels (i.e., both vRNA and viral mRNA) in the haemagglutination reaction samples. Only the Ct values for the NBISA01 haemagglutinations showed any decrease from the 0 hour to day 5. This decrease was evident even when oligodT primers were used for cDNA synthesis, confirming that there was de novo synthesis of virus genes in the erythrocytes. However, there are relatively long stretches of adenosine residues in the ISAV target gene that could allow detections of vRNA as well. The RPC/NB-04-085-1 haemagglutinations showed no changes in the Ct values at any sampling time point, indicating that the low pathogenic virus did not replicate in erythrocytes. Moreover, using virus titrations in the TO cell line, it was shown that NBISA01 haemagglutinations resulted in a productive infection. The increase in virus titre between day 0 and day 5 was only 100.75 TCID50 in contrast to the 10-fold increase in the viral transcript levels detected by real-time RT-PCR within the same samples. This may be due to three factors:  the lower sensitivity of the virus titration in TO cell line compared to real-time RT-PCR,  the fact that real-time RT- PCR also detects non infectious or defective particles which the TCID50 does not, and  the fact that the virus replication associated with haemagglutination involved only a single cycle of virus replication as multiple haemagglutination events were unlikely. It is interesting to note that avian erythrocytes (which have a dormant nucleus, in contrast to the complete nucleus in fish erythrocytes) also demonstrate virus uptake during haemagglutination by influenza A virus and show de novo synthesis of viral proteins but not production of new infectious virus particles  whereas mammalian erythrocytes that do not have a nucleus have completely lost the capacity for virus replication during influenza A virus-induced haemagglutination.
In addition to virus replication in haemagglutinations induced by the highly pathogenic NBISA01 strain, we found that there was also a higher relative fold increase of IFN-α transcripts than with the less pathogenic RPC/NB 04-085-1 strain which did not replicate in erythrocytes. The induction of the IFN-α gene closely followed the increase of NBISA01 transcripts in that by day 1 the viral transcripts started to increase simultaneously with the first peak of IFN-α transcripts. The NBISA01 haemagglutinations showed a pattern of fold increase with a peak of IFN-α and Mx transcripts for a shorter period of time. This pattern of induction is not continuous like the inductions in TO cells infected with ISAV . This may be due to differences between the cell cycle of TO cells (which actively multiply) and erythrocytes (which do not multiply) in combination with the single cycle of virus replication that probably occurs during haemagglutination in contrast to multiple cycles of infection possible in TO cells. For the NBISA01 haemagglutinations in the present study, the level of IFN-α appeared to have a transient biphasic peak at 1 and 3 days post-haemagglutination.
Both the UV- and heat-inactivated preparations of both NBISA01 and RPC/NB-04-085-1 viruses and the L-15 medium assay (negative control) showed no haemagglutination. The UV-inactivated viruses also showed no induction of type I IFN system genes whereas the heat-inactivated viruses and the L-15 medium assay showed induction of the type I IFN system genes by day 5 similar to those due to polyI:C stimulation by day 3. The absence of haemagglutination in the UV-inactivated viruses was unexpected since the inactivation was directed towards the viral genome and not the surface glycoproteins required for haemagglutination. One possible explanation is that the UV lamp generated sufficient heat over the 18 hours of exposure to contribute to the denaturation of the virus surface glycoproteins. In contrast, the heat inactivation alone had no effect on the viral ssRNA genome but probably even disrupted the structural viral proteins so that the virus RNA was exposed and easily detected by the erythrocyte viral pattern recognition receptors so as to induce the observed minimal induction of the Type I IFN system genes. Alternatively, these minimal responses were non-specific since they were also seen with L-15 medium alone (negative control assays).
STAT-1 expression has been studied in other fish species including rainbow trout  but this is the first study to investigate STAT1 expression in Atlantic salmon. It appears that induction of STAT1 is not as highly responsive to IFN induced by virus infection as the other component genes of the Type I IFN system in that the fold increase was low compared to the other genes studied. This could be related to the multifunctional role of this transcription factor.
The NBISA01 haemagglutination showed a moderate relative fold increase of PKZ transcripts. PKR gene has been characterized in rainbow trout , and crucian carp . PKR is one of the antiviral proteins of the IFN system . For Atlantic salmon, only the sequence of a Z-DNA binding eIF-2α kinase is available in the GeneBank database. In crucian carp cells, PKR mRNA has been shown to be up-regulated in response to either IFN protein treatment or virus infection. Moreover, in rainbow trout PKR has been shown to be activated to phosphorylate eIF-2α in response to polyI:C stimulation and virus infection. It is very interesting that Atlantic salmon erythrocytes showed expression of PKZ gene, albeit moderate, in response to haemagglutination with a pathogenic ISAV strain.
In the present work the RT quantitative PCR data showed varying levels of induction of key Type I IFN system genes IFN-α, Mx, ISG15, STAT1, and PKZ upon haemagglutination of erythrocytes by the highly pathogenic NBISA01 virus. This virus induced significantly high relative fold increase in IFN-α transcripts compared to the RPC/NB-04-085-1 virus although both viruses had similar levels of induction of Mx, ISG15 and STAT1. The slight Type I IFN system response with RPC/NB-04-085-1 haemagglutinations which involve only virus adsorption but no endocytosis  and no replication is an interesting observation. Various viral pathogen recognition receptors are involved in the detection of viral pathogen associated molecular patterns such as dsRNA, ssRNA, DNA, and viral glycoproteins like haemagglutinin proteins. In the case of human cytomegalovirus , herpes simplex  and human immunodeficiency virus , peripheral mononuclear cells have been shown to induce Type I IFN independent of virus replication, purely by the viral glycoproteins. Thus the low level Type I IFN system gene induction detected in the present study for the low pathogenic RPC/NB-04-085-1 virus could possibly be associated with the detection of the viral HE protein during haemagglutination.
PolyI:C is a synthetic dsRNA that is detected either by the RNA helicases or the Toll-like receptor 3 (TLR3) to activate the transcription of type I IFN system genes (reviewed in ). This has been shown in the macrophage-like Atlantic salmon TO cell line . Stimulation of erythrocytes with polyI:C did not, however, result in induction of Type I IFN genes even with a polyI:C dose 10 times that used elsewhere . It was previously reported that CHSE-214 cells incubated with polyI:C show no expression of Mx , probably because of inefficient response to polyI:C stimulation. In the present study, NBISA01 endocytosis and replication in Atlantic salmon erythrocytes resulted in up-regulation of the IFN-α gene possibly by detection of the viral molecular patterns by the erythrocytes. Thus the minimal induction of the Type I IFN genes in fish erythrocytes by polyI:C could be due to inefficient membrane transport activity of erythrocytes.
In conclusion, we report here that ISAV-induced haemagglutination by a pathogenic virus strain results in virus uptake and productive infection of Atlantic salmon erythrocytes accompanied by significant induction of IFN-α. This study also highlights the critical role of ISAV strain variation in the initial stages of the virus-cell interaction during haemagglutination, and possibly in the pathogenesis of ISA. Moreover, the study shows for the first time that fish erythrocytes immunologically respond to ISAV infection.
Two ISAV isolates of differing genotypes and pathogenicities were used. NBISA01 is a highly pathogenic strain belonging to the North American genotype, whereas RPC/NB 04-085-1 is a low pathogenic strain of the European genotype found in eastern Canada and its HE protein places it in a unique, highly polymorphic region (HPR) group . The two isolates have variations in the amino acid sequence of the HPR region with amino acid deletions of 13 and 17 amino acids for RPC/NB-04-085-1 and NBISA01, respectively . The viruses were propagated in the TO cell line  and the cell lysates were titrated on TO cell monolayers as previously described  prior to use in the subsequent studies.
The viruses were inactivated by using either UV light or heat treatment. UV inactivation of ISAV was carried out with a germicidal UV lamp (G30T8 with 30 Watt and 36 inch length, and a UV intensity of 125 μW/cm2 at 1 meter from the lamp) suspended in a biological safety cabinet (Class II A/B3 BSC, Thermo Forma) following the procedure reported by Oye and Rimstad , with minor modifications. Briefly, 20.0 mls of virus suspension in a 4-well cell culture plate were placed 10 cm from the UV lamp. The plate was left open under UV-exposure for 18 hours. Heat inactivation of ISAV was performed by incubating 1.0 ml of the virus suspension in a 1.5-ml microfuge tube at 56°C for 5 minutes. Complete inactivation of virus by both methods was confirmed by titration in TO cell monolayers  before use in the haemagglutination reactions.
Atlantic salmon erythrocytes were collected from specific pathogen free 100 g-Atlantic salmon using EDTA-coated Vacutainer® tubes. In preliminary experiments, the washed erythrocytes suspended in phosphate buffered saline (PBS) were not viable beyond 48 hours. Therefore, common fish cell line growth media, Leibovitz's L-15 (Invitrogen) and Hanks minimum essential medium (BioWhittaker) (HMEM), were tested to identify one that better maintained erythrocyte viability. Using the Trypan blue dye exclusion test, we found that erythrocytes resuspended in L-15 growth medium had lower cell deaths, and those surviving maintained a normal shape in contrast to erythrocytes in HMEM growth medium which were shrunken. In subsequent experiments, the erythrocytes were washed and then resuspended in L-15 medium supplemented with 10% foetal bovine serum, 2 mM L-glutamine, 100 IU/ml penicillin G, 100 μg ml-1 streptomycin, and 0.25 μg ml-1 amphotericin B. For determining the haemagglutination (HA) units of the stock virus preparations, haemagglutination reactions were set up using 50 μl of two-fold dilutions of the two virus isolates and 50 μl of 1% erythrocytes . The haemagglutination was set using four wells for each virus dilution; 1 HA unit was defined as the highest virus dilution that induced haemagglutination in four wells within 1 hr at room temperature. Subsequent haemagglutination reactions used 1 HA unit in 50 μl of virus preparation 50 μl of 1% erythrocytes in L-15 growth medium. The sealed plates were kept at room temperature for one hour, and then transferred to 16°C for the extended incubation until sampled.
PolyI:C stimulation of Atlantic salmon erythrocytes
Washed Atlantic salmon erythrocytes were resuspended in L-15 medium consisting of 10% FBS, 2 mM L-glutamine, 100 IU ml-1 penicillin G, 100 μg ml-1 streptomycin, and 0.25 μg ml-1 amphotericin B, and polyinosinic:polycytidylic acid (polyI:C) (Amersham Biosciences) at a final concentration of 30 μg ml-1. One hundred microliters of 1% erythrocyte suspension was added to each well of the haemagglutination plate and incubated at 16°C. The preparations were sampled after 12, 24, and 72 hours.
Detection of cytokine induction and virus replication using real-time RT-PCR with SYBR Green chemistry
Total RNA from the haemagglutination samples was extracted from 375 μl of homogeneous erythrocyte suspensions using 1.25 ml of TRIZOL Reagent (Invitrogen). RNA extraction was performed from two separate samples at each sampling point, which were then pooled before DNase treatment using the DNase treatment kit (Roche) prior to RT-PCR amplification.
The oligonucleotide primers, amplicon length and amplification efficiency of the real time RT-PCR primers amplifying IFN, Mx, 18S, ISG15 and STAT1 genes
Amplicon length (bp)
As IFN Fwd1
As IFN Rev1
As Mx Fwd
As Mx Rev
As 18S Fwd
As 18S Rev
As ISG15 Fwd
As ISG15 Rev
As STAT1 Fwd
As STAT1 Rev
As PKZ Fwd
As PKZ Rev
For quantifying the level of viral RNA, real-time RT-PCR was done using the RNA Amplification Kit SYBR Green I (Roche) and the primer pair designed by Devold et al.  to amplify 220 bp of the ISAV segment 8, and previously described for real time RT-PCR , with minor modifications. Briefly, the 20 μl reaction consisted of 50 ng of total RNA in a master mix prepared using 0.3 μl of the 20 μM of the forward and reverse primers (final concentration of 0.3μM), 4 μl SYBR Green, 0.2 μl LC-RT PCR enzyme mix, 3 μl of the 5x resolution solution, 1.6 μl of the 25 mM stock MgCl2 (a final concentration of 0.005 μM), and nuclease free water adjusted to a final volume of 20 μl. The cycling conditions consisted of one cycle of RT at 55°C for 30 min, initial denaturation at 95°C for 30 s followed by 50 cycles of 95°C for 5 s, 59°C for 10 s, 72°C for 10 s, and detection at 80°C for 2 s. The Ct values and melting curve data were analyzed using LightCycler software version 3.5 (Roche). Melting curve analysis was performed from 70°C to 95°C in 0.1°C/s increments to verify the specificity of the amplicons so as to interpret SYBR Green fluorescence data. The amplicons were also run in 1% agarose gel electrophoresis in 1x Tris acetate EDTA buffer (40 mM Tris acetate and 1 mM EDTA) (Fisher Scientific) and stained with ethidium bromide and photographed under 304 nm UV light.
Detection of virus replication by titration on TO cell monolayers
Total cell lysates of the haemagglutination assays (i.e., total virus) were titrated to determine growth cycles of the virus strains in Atlantic salmon erythrocytes. Virus titration utilized serial 10-fold dilutions of the samples ranging from 10-1 to 10-8, inoculated on 48-well cell culture plates containing TO cell monolayers using 4 wells per dilution, from which the median tissue culture infectious dose (TCID50) was determined as previously described . Each sampling point was titrated in triplicate to obtain a standard deviation.
This work was supported by the Natural Sciences and Engineering Research Council (NSERC) of Canada Discovery Grant to FSBK. We thank the staff of Aquatic Animal Facility of the Atlantic Veterinary College, especially Vicki Leggo for the kind cooperation and provision of fish for blood collection.
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