Fig. 3

A condensed (50% cutoff) neighbor-joining tree of 117 large terminase subunit amino acid sequences from tailed phages and bacteria. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) is shown next to the branches [70, 71]. The names of the phages or bacterial sequences are shown at the right of each branch. Coloured boxes demarcate related groups of terminases with similar packaging strategies. Accession numbers for aligned sequences are: Bcp1 - YP_009031337; Bth - WP_063675351; phBC6A51 - NP_852525; Grass - YP_008771417; phiNIT1 - YP_008318309; Oceanibulbis- KZY05261; vB_PmaS_IMEP1 - YP_009126425; eHP-41 - AFH23043; ECBP1 - YP_006908844; RcapMu - YP_004934675; Kpn - WP_048270899; Rhsp - WP_011840500; Tripp - YP_009210523; Bsu - CUB50907; G1 - YP_240892; Mater - YP_009151157; Mcat18 - AKI27764; SfV - NP_599034; Phi1 - ALY08144; Cd - YP_001686870; Phi1M2-2 - AIM40760; 1 N2-2 - AIM40704; eHP30 - AFH22611; S20 - YP_007673310; ES18 - YP_224140; phiHSIC - YP_224236; HK620 - NP_112076; APSE-1 - NP_050979; LL-H - YP_001285878; phig1e - NP_695170; Lj965 - NP_958579; O1205 - NP_695104; phiETA - NP_510934; P22 - AAA72959; T3 - NP_523347; phiA1122 - NP_848309; gh-1 - NP_813786; PP03 - WP_010953264; phiKMV - NP_877482; SP6 - NP_853601; Tum2 - WP_035256432; Cc1 - NP_421586; RadMu - NP_285417; FluMu - P44224; Bruc1 - AAL52531; RhodoGTA - AAF13179; phiKO2 - YP_006582; PY54 - NP_892047; ST64B - NP_700375; phiP27 - NP_543088; phiE125 - NP_536358; HK97 - NP_037698; A2 - NP_680484; Sfi19 - NP_049926; BK5-T - NP_116494; phiadh - CAB52518; P008 - AAY97804; biL170 - AAC27181; biL67 - NP_042313; Xp10 - NP_858953; phiC31 - NP_047924; phiBT1 - NP_813693; L5 - NP_039677; D29 - NP_046828; Bcep22 - NP_944278; T4 - NP_049776; RB49 - NP_891724; Aeh1 - NP_944105; KVP40 - NP_899601; phiCTX - NP_490600; P2 - NP_046758; L-413c - NP_839851; 186 - NP_052251; Fels-2 - YP_001718747; HP1 - NP_043485; K139 - NP_536648; 933 W - ; Mu - NP_050632; SP18 - YP_003934803; TP901-1 - NP_112694; Lambda - NP_040581; N15 - NP_046897; WO - BAA89640; Gifsy-1 - YP_001700612; Gifsy-2 - YP_001700675; Fels-1 - YP_001700563; vB_PaeS_PMG1 - YP_005098205; PsymV2 - YP_009017589; Shpa - AKG94514; Shbh1 - AMQ66579; Mgbh1 - AMQ66673; Basilisk - AGR46580; SPO1 - YP_002300330; PBC1 - YP_006383455; EEOGHAN - YP_007517399; FINN - YP_007517630; ANDROMEDA - YP_007517474; CURLY - YP_007517553; BCJA1c - YP_164412; IEBH - YP_002154374; CHERRY - ABA46388; phi105 - ADF59135; BtCS33 - YP_006488672; GVE2 - YP_001285808; Slash - YP_008771935; Staley - YP_008770747; D-1873 - EES90358; vB_BanS_Tsamsa - YP_008873483; 949 - YP_004306307; SpBc2 - NP_046608; c-st - YP_398598; phiMHa1 - YP_655470; M42548 - AGK02301; SPP1 - NP_690654; TP21-L - YP_002333563; GVE3 - YP_009223720; GBSV1 - YP_764473; phiO2 - YP_008240332; GBK2 - YP_009010473