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Table 1 Primers used in this study

From: Detection and phylogenetic analysis of porcine epidemic diarrhea virus in central China based on the ORF3 gene and the S1 gene

Primer name

Nucleotide sequence, 5′-3′

Size(bp)

Primer locationa

PEDV-F

TTTATTCTGTCACGCCAT

197

2,2709–22,726

PEDV-R

AGATTTACAAACACCTATGTTA

 

22,884–22,905

S1U1-F

GGTAAGTTGCTAGTGCGTAA

1461

20,570–20,589

S1U1-R

CAGGATCATCACAATAAAGAA

22,010–22,030

S1U2-F

TTTCTGGACCATAGCATC

1117

21,939–21,956

S1U2-R

AGCACAATCAACACTAAC

23,038–23,055

ORF3-F

TCCTAGACTTCAACCTTACG

833

24,741–24,760

ORF3-R

GGTGACAAGTGAAGCACAGA

25,551–25,570

  1. aIn relation to the genome of PEDV CV777 strain (AF353511)