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Table 1 Identities between isolate PVYNTN-HN1 and other isolates of Potato virus Y (PVY) at both nucleic acid and protein levels

From: Differential pathogenicity of two different recombinant PVYNTN isolates in Physalis floridana is likely determined by the coat protein gene

  Length Sequence Identity (%) (Nucleic acid, Protein)
  Gene nucleotide, size (bp) Protein size (aa) PVYO-RB (HM367076) PVYN-605 (X97895) PVYN-Jg (AY166867) PVYNTN-Hun (M95491) PVYN:O-Mb112 (AY745491) PVYNTN-HN2 (GQ200836)
5' UTR 1-188, 188 - 66.0, - 100, - 85.6, - 100, - 100, - 99.5, -
P1 189-1013, 825 275 73.0, 71.3 99.3, 99.6 92.2, 91.3 98.7, 98.2 99.6, 100 98.9, 100
HC-Pro 1014-2408, 1395 465 82.2, 90.5 98.8, 99.4 92.6, 96.8 99.1, 99.1 98.4, 99.4 98.4, 98.9
P3 2409-3503, 1095 365 97.3, 98.6 84.7, 92.6 84.6, 92.3 99.4, 99.7 99.1, 99.7 96.3, 97.8
6K1 3504-3659, 156 52 97.4, 100 81.4, 84.6 82.1, 86.5 99.4, 100 100, 100 98.1, 98.1
CI 3660-5561, 1902 634 97.3, 99.1 84.1, 95.7 84.1, 95.7 99.6, 99.5 99.3, 99.5 98.7, 99.7
6K2 5562-5717, 156 52 95.5, 100 82.1, 90.4 79.5, 90.4 100, 100 100, 100 99.4, 98.1
VPG 5718-6281, 564 188 86.9, 92.0 97.0, 99.5 95.6, 97.3 98.9, 99.5 87.8, 94.7 97.9, 99.5
NIa 6282-7013, 732 244 80.9, 93.6 99.3, 98.2 97.0, 98.8 99.2, 98.8 80.6, 92.2 99.0, 99.2
NIb 7014-8570, 1557 519 83.5, 93.6 98.8, 99.0 97.6, 98.7 98.7, 98.7 84.9, 94.4 98.2, 99.0
CP 8571-9371, 801 267 90.8, 92.9 97.5, 98.9 96.5, 98.9 99.4, 98.9 91.4, 94.4 91.6, 94.0
3' UTR 9372-9702, 331 - 98.2, - 84.0, - 85.8, - 99.1, - 98.8, - 99.1, -
Full length 1-9702, 9702 3061 87.9, 92.8 93.2, 97.3 90.9, 95.9 99.2, 99.1 94.1, 97.4 97.7, 98.7