Fig. 2
From: Identification and characterisation of Gamma-herpesviruses in zoo artiodactyla
Estimation of the evolutionary relationships between the amino acid sequences of the herpesvirus DNA polymerase. The maximum likelihood phylogenetic tree presented as a circular cladogram was created by using seventeen herpesvirus partial DNA polymerase catalytic subunit translated amino acid sequences generated in this study (showed with the corresponding code number) and 44 herpesvirus DNA polymerase catalytic subunit amino acid reference sequences downloaded from GenBank. Accession numbers of the reference sequences are listed in the supplementary file Table 1. The bootstrap probability (1000 replicates) is shown next to each node. Subfamilies are represented with different colours: green (α-herpesvirinae), blue (β-herpesvirinae) and fuchsia (γ-herpesvirinae). Genera within the γ-herpesvirinae subfamily are also indicated by different colours: red (Lymphocryptovirus), brown (Manticavirus), purple (Macavirus), orange (Patagivirus), teal (Rhadinovirus), black (Percavirus) and grey (Bossavirus). List of abbreviations, clockwise starting from the first virus in the α-herpesvirinae subfamily: GaAHV1 (Gallid γ-herpesvirus 1), GaAHV2 (Gallid γ-herpesvirus 2), BoAHV2 (Bovine γ-herpesvirus 2), CpAHV1 (Caprine γ-herpesvirus 1), ChAHV5 (Chelonid γ-herpesvirus 5), CeBHV5 (Cercopithecine γ-herpesvirus 5), MuBHV8 (Murid γ-herpesvirus 8), CdBHV2 (Caviid γ-herpesvirus 2), HuBHV7 (Human γ-herpesvirus 7), ElBHV1 (Elephantid γ-herpesvirus 1), DeGHV1 (Common bottlenose dolphin γ-herpesvirus 1), EqGHV2 (Equid γ-herpesvirus 2), EqGHV5 (Equid γ-herpesvirus 5), VeGHV1 (Vespertilionid γ-herpesvirus 1), MusGHV1 (Mustelid γ-herpesvirus 1), FcaGHV1 (Felis catus γ-herpesvirus 1), HaSHV (Harp seal herpesvirus), BoGHV4 (Bovine γ-herpesvirus 4), WMHV (Wood mouse herpesvirus), MuGHV4 (Murid γ-herpesvirus 4), CrGHV2 (Cricetid γ-herpesvirus 2), SaGHV2 (Saimiriine γ-herpesvirus 2), AtGHV3 (Ateline γ-herpesvirus 3), RFHV (Retroperitoneal fibromatosis-associated herpesvirus), HuGHV8 (Human γ-herpesvirus 8), MneRV2 (Macaca nemestrina rhadinovirus 2), McGHV11 (Macacine γ-herpesvirus 11), McGHV5 (Macacine γ-herpesvirus 5), EfHV (Eptesicus fuscus γ-herpesvirus), CpGHV2 (Caprine γ-herpesvirus 2), OvGHV2 (Ovine γ-herpesvirus 2), AlGHV1 (Alcelaphine γ-herpesvirus 1), HiGHV1 (Hippotragine γ-herpesvirus 1), AlGHV2 (Alcelaphine γ-herpesvirus 2), BoGHV6 (Bovine γ-herpesvirus 6), PLHV2 (Porcine lymphotropic herpesvirus 2), PLHV1 (Porcine lymphotropic herpesvirus 1), PLHV3 (Porcine lymphotropic herpesvirus 3), VoGHV1 (Vombatid γ-herpesvirus 1), PcGHV1 (Phascolarctid γ-herpesvirus 1), ClGHV3 (Callitrichine γ-herpesvirus 3), McGHV4 (Macacine γ-herpesvirus 4), McGHV10 (Macacine γ-herpesvirus 10) and HuGH4 (Human γ-herpesvirus 4)