Fig. 3
From: Isolation and pathogenicity of porcine circovirus type 2 in mice from Guangxi province, China
Homology analysis of Cap nucleotide and amino acid sequences of the isolates and reference strains. (A) Nucleotide sequence alignment of Cap genes between PCV2-GX-6 strain and other isolates. Base deletion site of PCV2-GX-6 was marked with red box. Base mutation site of PCV2-GX-6 was marked with green box. (B) Amino acid sequence alignment of Cap genes between PCV2-GX-6 strain and other isolates, mutation sites were marked with blue box. (C) Structure of PCV2-GX-6 Cap protein was predicted by Swiss-model (https://swissmodel.expasy.org/interactive), mapped, and compared with PCV2-JS17-8 (accession no.: MH211363) via Pymol.