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Fig. 1 | Virology Journal

Fig. 1

From: Genome analysis of SARS-CoV-2 isolates from a population reveals the rapid selective sweep of a haplotype carrying many pre-existing and new mutations

Fig. 1

Maximum Likelihood phylogeny of new SARS-CoV-2 variants and database sequences. The reference genome from Wuhan (yellow) is found at the base. The genome sequences of the first wave (black) from India, α from UK (red), δ from different states of India (blue) collected from the NCBI and GISAID SARS-CoV-2 database, and omicron (purple) variants from USA and Bahrain are clustered in separate clades. All of the 92 sequences (green) from Assam derived in this study are denoted by ‘ICL’ followed by a number and they are clustered within the δ variant clade

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