Table 1 Sample and sequence information of the collected samples in this study
Sample Name | Sex | Age | Total read | Read after QC | Length | Percent covered (%) | Mean coverage (×) | Genotype | GenBank Accession No. |
|---|---|---|---|---|---|---|---|---|---|
BCSIR-05 | Female | 26 | 4,311,927 | 4,227,543 (98.04%) | 10,707 | 98.89 | 28.15 | DENV-3 Genotype I | OP741243 |
BCSIR-IBS-D1 | Male | 12 | 3,507,870 | 3,452,844 (98.43%) | 10,686 | 99.87 | 48375.9 | DENV-3 Genotype I | ON103303 |
BCSIR-IBS-D2 | Female | 30 | 3,673,245 | 3,618,733 (99.00%) | 10,686 | 99.73 | 16465.9 | DENV-3 Genotype I | ON103391 |
BCSIR-IBS-D3 | Female | 8 | 3,249,713 | 3,143,738 (96.74%) | 10,672 | 99.57 | 3415.74 | DENV-3 Genotype I | ON111446 |
BCSIR-IBS-D4 | Male | 61 | 4,200,439 | 4,120,093 (98.09%) | 10,703 | 99.88 | 82474.8 | DENV-3 Genotype I | ON115022 |
BCSIR-IBS-D5 | Male | 21 | 2,428,255 | 2,150,805 (88.57%) | 10,669 | 99.64 | 11612.4 | DENV-3 Genotype I | ON115024 |
BCSIR-IBS-D6 | Male | 4 | 2,476,067 | 2,454,059 (99.11%) | 10,667 | 99.55 | 2491.9 | DENV-3 Genotype I | ON115026 |
BCSIR-IBS-D7 | Male | 31 | 3,347,486 | 3,291,974 (98.34%) | 10,683 | 99.71 | 3882.28 | DENV-3 Genotype I | ON115030 |
BCSIR-IBS-D8 | Male | 10 | 3,585,995 | 3,564,733 (99.41%) | 10,688 | 99.89 | 72808.2 | DENV-3 Genotype I | ON115183 |
BCSIR-IBS-D9 | Female | 3 | 1,372,523 | 1,196,648 (87.19%) | 10,669 | 99.51 | 708.61 | DENV-3 Genotype I | ON115812 |
BCSIR-IBS-D10 | Female | 41 | 3,921,170 | 3,885,916 (99.10%) | 10,686 | 99.93 | 68242.7 | DENV-3 Genotype I | ON115815 |
BCSIR-IBS-D11 | Male | 24 | 2,418,634 | 2,372,894 (98.11%) | 10,660 | 97.78 | 140.457 | DENV-3 Genotype I | ON115817 |
BCSIR-IBS-D12 | Male | 26 | 2,329,130 | 2,288,986 (98.28%) | 10,667 | 99.51 | 4856.02 | DENV-3 Genotype I | ON115819 |
BCSIR-IBS-D13 | Female | 60 | 2,782,261 | 2,631,028 (94.56%) | 10,668 | 99.20 | 401.65 | DENV-3 Genotype I | ON116130 |
BCSIR-IBS-D14 | Female | 22 | 2,758,002 | 2,688,567 (97.48%) | 10,707 | 99.74 | 26583.9 | DENV-3 Genotype I | ON127419 |
BCSIR-IBS-D15 | Male | 37 | 1,743,673 | 1,712,426 (98.21%) | 10,707 | 99.56 | 5517.04 | DENV-3 Genotype I | ON127534 |
BCSIR-IBS-D16 | Male | 50 | 2,964,830 | 2,913,773 (98.28%) | 10,660 | 98.26 | 132.21 | DENV-3 Genotype I | OP740753 |
BCSIR-IBS-D17 | Male | 12 | 2,008,835 | 1,990,945 (99.11%) | 10,669 | 99.56 | 10660.1 | DENV-3 Genotype I | ON127538 |
BCSIR-IBS-D18 | Male | 24 | 2,370,633 | 2,314,886 (97.65%) | 10,707 | 99.73 | 14478.9 | DENV-3 Genotype I | ON127551 |
BCSIR-IBS-D19 | Female | 5 | 310,019 | 300,836 (97.04%) | 10,647 | 99.44 | 87.73 | DENV-3 Genotype I | ON127553 |
BCSIR-IBS-D20 | Male | 50 | 2,452,702 | 2,403,740 (98.00%) | 10,686 | 99.05 | 129.598 | DENV-3 Genotype I | OP741244 |
BCSIR-IBS-D21 | Male | 35 | 1,543,653 | 1,445,717 (93.66%) | - | - | - | - | - |
BCSIR-IBS-D22 | Male | 52 | 1,369,461 | 1,172,879 (85.65%) | - | - | - | - | - |
BCSIR-IBS-D23 | Male | 55 | 1,419,348 | 1,348,541 (95.01%) | - | - | - | - | - |