Metagenomic analysis of viral diversity and a novel astroviruse of forest rodent

Table 1 Fecal samples used for metagenomic analysis and data generation

Sample	Insert size (bp)	Seq strategy	Raw data	Clean data	Clean_Q20	Clean_Q30	Clean_GC (%)	Effective (%)
Myodes rufocanus	350	(150:150)	2,504.06	2,384.93	76.53	65.45	58.69	95.242
Apodemus peninsulae	350	(150:150)	2,234.18	2,090.33	75.94	64.76	57.70	93.561
Apodemus agrarius	350	(150:150)	2,045.27	1,994.32	87.12	78.68	52.56	97.509
Tamias sibiricus	350	(150:150)	2,459.21	2,391.77	83.63	73.78	52.87	97.258
Sciurus vulgaris	350	(150:150)	2,155.58	2,007.30	73.76	62.15	59.05	93.121
Cricetulus triton	350	(150:150)	2,270.82	2,148.70	78.59	67.93	55.53	94.622

ISSN: 1743-422X