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Table 1 Characteristics of datasets involved in the analysis and validation

From: Decoding pathogenesis factors involved in the progression of ATLL or HAM/TSP after infection by HTLV-1 through a systems virology study

Dataset

Platform

Number of Samples

Datasets for main analyses

 GSE29312

Illumina HumanHT-12 V3.0 expression beadchip

(GPL6947)

Normal: 9

ACs: 20

HAM/TSP: 10

 GSE29332

Illumina HumanWG-6 v3.0 expression beadchip

(GPL6884)

Normal: 8

ACs: 17

HAM/TSP: 10

 GSE55851

Agilent-026652 Whole Human Genome Microarray 4 × 44 K v2

(GPL10332)

Normal: 3

ACs: 6

ATLL: 12

 GSE33615

Agilent-014850 Whole Human Genome Microarray 4 × 44 K G4112F

(GPL4133)

Normal: 21

ATLL: 52

Datasets for validation

 GSE38537

Agilent-014850 Whole Human Genome Microarray 4 × 44 K G4112F

(GPL6480)

ACs: 4

HAM/TSP: 4

 GSE43017

Affymetrix Human Genome U133 Plus 2.0 Array

(GPL570)

ATLL: 7