Table 1 Bayesian phylogenetic tMRCA estimates for genomic regions of HIV-1 CRF01_AE from subjects P1 (defendant) and P2 (prosecutor) under coalescent tree priors
From: Phylogenetic evidence of HIV-1 transmission linkage between two men who have sex with men
Genomic region | Coalescent tree prior | Subject P1 (defendant) | Subject P2 (prosecutor) | ||||
|---|---|---|---|---|---|---|---|
Mean | Lower 95% HPD | Upper 95% HPD | Mean | Lower 95% HPD | Upper 95% HPD | ||
gag | Constant | 2017-12-10 | 2017-07-25 | 2018-03-22 | 2018-04-28 | 2018-01-24 | 2018-06-18 |
Expansion | 2017-12-08 | 2017-07-24 | 2018-03-25 | 2018-04-27 | 2018-01-22 | 2018-06-18 | |
Exponential | 2018-01-31 | 2017-11-14 | 2018-03-29 | 2018-05-01 | 2018-01-29 | 2018-06-18 | |
Logistic | 2017-12-06 | 2017-07-21 | 2018-03-27 | 2018-04-26 | 2018-01-15 | 2018-06-18 | |
pol | Constant | 2017-12-02 | 2017-03-25 | 2018-04-07 | 2018-05-15 | 2018-03-22 | 2018-06-18 |
Expansion | 2017-12-23 | 2017-05-20 | 2018-04-05 | 2018-05-16 | 2018-03-25 | 2018-06-18 | |
Exponential | 2018-02-07 | 2017-11-01 | 2018-04-04 | 2018-05-17 | 2018-03-30 | 2018-06-18 | |
Logistic | 2017-12-13 | 2017-04-14 | 2018-04-06 | 2018-05-18 | 2018-04-04 | 2018-06-18 | |