Skip to main content

Table 4 Sequencing coverage of clinical isolates from Indonesia, using the multiplex and single-plex amplification approaches

From: Assessment of a multiplex PCR and Nanopore-based method for dengue virus sequencing in Indonesia

IDSerotypeGenotypeCt valueReads passing QCCoding-Region Coverage (%)Single-plex Amplification Result (5′ → 3′)
1X20X12345
BTM-0771I15.276,301100100++++
BJM-2491I28.251,55410095.89++
BJM-1881I36.657,00299.9586.58+
BTM-2332Cosmopolitan15.433,908100100+++++
AMB-0892Cosmopolitan26.342,694100100++++
BJM-1502Cosmopolitan27.882,89110099.27+
BJM-1523I17.167,280100100+++++
BJM-1023I29.150,80310099.05+++
BJM-1573I37.971,22610096.22
BJM-1774II30.545,82398.0281.38+