Table 3 Nucleotide sequence identity (%) of the two newly generated full-length sequences to other published genomes
From: Investigations into the presence of nidoviruses in pythons
Position: length | Sequence identity | Nucleotide sequence identity | Amino acid sequence identity | ||||||
|---|---|---|---|---|---|---|---|---|---|
Morelis viridis | Morelis viridis | between | Python regius | Python morulus | Morelia viridis | Python regius | Python morulus | Morelia viridis | |
MK182566 | MK182569 | MK182566/MK182569 | KJ541759 | KJ935003 | MF351889 | KJ541759 | KJ935003 | MF351889 | |
ORF1A; replicase gene | 1.032–17.750: 16.719 | 1.032–17.666: 16.635 | 99,47% | 58.12/57.95% | 59.71/59.51% | 61.93/61.72% | 54.71/54.56% | 54.95/54.85% | 57.31/57.81% |
ORF1B; replicase gene | 17.951–24.667: 6717 | 17.867–24.583: 6717 | 100% | 80.79% | 80.65% | 79.81% | 85.35% | 85.49% | 83.92% |
ORF2; spike gene | 24.776–27.605: 2880 | 24.642–27.521: 2880 | 100% | 72.33% | 71.54% | 70.83% | 72.25% | 72.16% | 72.68% |
ORF3; glycoprotein gene | 27.602–28.372: 771 | 27.518–28.288: 771 | 100% | 53.54% | 49.47% | 47.49% | 40.77% | 38.65% | 33.21% |
ORF4; matrixprotein gene | 28.374–29.030: 657 | 28.290–28.946: 657 | 100% | 71.84/71.99% | 70.62/70.78% | 68.33/78.59% | 76.15% | 74.31% | 73.97% |
ORF5; nucleoprotein gene | 29.044–29.502: 459 | 28.960–29.418: 459 | 99,78% | 70.13/69.91% | 70.99/70.78% | 69.48/69.69% | 68.63% | 68.63% | 66.67% |
ORF6; glycoprotein gene | 29.518–30.483: 966 | 29.434–30.399: 966 | 100% | 52.88% | 54.25% | 71.76% | 39.47% | 41.01% | 43.60% |
ORF7; glycoprotein gene | 30.399–31.901: 1503 | 30.315–31.817: 1503 | 100% | 66.91% | 66.27% | 68.12% | 61.68% | 59.64% | 60.24% |