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Table 1 Primers used in this study

From: Important roles of C-terminal residues in degradation of capsid protein of classical swine fever virus

Primer

Sequence (5′–3′)

Use

C-F

GTACTCGAGATGTCTGATGATGGCGCA

Amplification of C, CΔC, CΔ8, CΔ7, CΔ5 and CΔ2

CΔN-F

TACTCGAGATGCCACCCGACGCT

Amplification of CΔN

C-R

ATGGATCCCGGGCTTCAACTGGTT

Amplification of C and CΔN

CΔC-R

ATGGATCCCGCTTAGTTCTGCTGTC

Amplification of CΔC

CΔ8-R

CGGATCCCGAATTGTTATTACCGC

Amplification of CΔ8

CΔ7-R

CGGATCCCGCATAATTGTTATTAC

Amplification of CΔ7

CΔ5-R

CGGATCCCGATACAACATAATTGT

Amplification of CΔ5

CΔ2-R

CGGATCCCGAACTGGTTGATACAA

Amplification of CΔ2

qPCR-EGFP-F

ATGGCCGACAAGCAGAAGAA

qRT-PCR for detection of EGFP

qPCR-EGFP-R

AACTCCAGCAGGACCATGTG

qPCR-C-F

ACAGCAGAACTAAGCCACCC

qRT-PCR for detection of C

qPCR-C-R

TCTTGTTGTGGTACAGGCCG

qPCR-GAPDH-F

GAAGGTCGGAGTGAACGGATTT

qRT-PCR for detection of GAPDH

qPCR-GAPDH-R

TGGGTGGAATCATACTGGAACA