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Table 2 Nucleotide sequences and amino acid substitution in the full VP2 gene of CPV-2

From: Molecular epidemiology of canine parvovirus type 2 in Vietnam from November 2016 to February 2018

Strains Position of nucleotide sequence (amino acid)
13–15 (5) 259–261 (87) 799–801 (267) 898–900 (300) 964–966 (322) 967–969 (323) 970–972 (324) 1000–1002 (334) 1021–1023 (341) 1108–1110 (370) 1276–1278 (426) 1318–1320 (440) 1339–1341 (447) 1663–1665 (555)
Reference strain
 CPV-2
  M38245 (USA) GCA (Ala) ATG (Met) TTT (Phe) GCT (Ala) ACA (Thr) AAC (Asn) TAT (Tyr) GCT (Ala) CCA (Pro) CAA (Gln) AAT (Asn) ACA (Thr) ATA (Ile) GTA (Val)
 CPV-2a
  M24000 (USA) GCA (Ala) TTG (Leu) TTT (Phe) GGT (Gly) ACA (Thr) AAC (Asn) TAT (Tyr) GCT (Ala) CCA (Pro) CAA (Gln) AAT (Asn) ACA (Thr) ATA (Ile) ATA (Val)
  FJ197847 (vaccine) GCA (Ala) ATG (Met) TTT (Phe) GGT (Gly) ACA (Thr) AAC (Asn) TAT (Tyr) GCT (Ala) CCA (Pro) CAA (Gln) AAT (Asn) ACA (Thr) ATA (Ile) GTA (Val)
 New CPV-2a
  AY742953 (USA) GCA (Ala) TTG (Leu) TTT(Phe) GGT (Gly) ACA (Thr) AAC (Asn) TAT (Tyr) GCT (Ala) CCA (Pro) CAA (Gln) AAT (Asn) ACA (Thr) ATA (Ile) GTA (Val)
  KF676668 (China) GCA (Ala) TTG (Leu) TAT(Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CAA (Gln) AAT (Asn) GCA (Ala) ATA (Ile) GTA (Val)
  KR611488 (China) GCA (Ala) TTG (Leu) TAT(Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CAA (Gln) AAT (Asn) GCA (Ala) ATA (Ile) GTA (Val)
  JQ686671 (China) GCA (Ala) TTG (Leu) TAT(Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CAA (Gln) AAT (Asn) GCA (Ala) ATA (Ile) GTA (Val)
 CPV-2b
  M78452 (USA) GCA (Ala) TTG (Leu) TTT (Phe) GGT (Gly) ACA (Thr) AAC (Asn) TAT (Tyr) GCT (Ala) CCA (Pro) CAA (Gln) GAT (Asp) ACA (Thr) ATA (Ile) GTA (Val)
 New CPV-2b
  AY742955 (USA) GCA (Ala) TTG (Leu) TTT(Phe) GGT (Gly) ACA (Thr) AAC (Asn) TAT (Tyr) GCT (Ala) CCA (Pro) CAA (Gln) GAT (Asp) ACA (Thr) ATA (Ile) GTA (Val)
  JQ268284 (China) GCA (Ala) TTG (Leu) TAT(Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CAA (Gln) GAT (Asp) GCA (Ala) ATA (Ile) GTA (Val)
  KR611459 (China) GCA (Ala) TTG (Leu) TAT(Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CAA (Gln) GAT (Asp) GCA (Ala) ATA (Ile) GTA (Val)
  KR611461 (China) GCA (Ala) TTG (Leu) TAT(Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CAA (Gln) GAT (Asp) GCA (Ala) ATA (Ile) GTA (Val)
 CPV-2c
  FJ005235 (USA) GCA (Ala) TTG (Leu) TTT (Phe) GCT (Ala) ACA (Thr) AAC (Asn) TAT (Tyr) GCT (Ala) CCA (Pro) CAA (Gln) GAA (Glu) ACA (Thr) ATA (Ile) GTA (Val)
  FJ222821 (Italy) GCA (Ala) TTG (Leu) TTT (Phe) GGT (Gly) ACA (Thr) AAC (Asn) TAT (Tyr) GCT (Ala) CCA (Pro) CAA (Gln) GAA (Glu) ACA (Thr) ATA (Ile) GTA (Val)
  KY937650 (China) GGA (Gly) TTG (Leu) TAT(Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CAA (Gln) GAA (Glu) ACA (Thr) ATA (Ile) GTA (Val)
  KU244254 (Taiwan) GCA (Ala) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATA (Ile) GTA (Val)
  AB120727 (Vietnam) GCA (Ala) TTG (Leu) TTT (Phe) GGT (Gly) ACA (Thr) AAC (Asn) TAT (Tyr) GCT (Ala) CCG (Pro) CAA (Gln) GAA (Glu) ACA (Thr) ATA (Ile) GTA (Val)
This study
 CPV-2a
  DN33/MK357724 GCA (Ala) ATG (Met) TTT (Phe) GCT (Ala) ACA (Thr) AAC (Asn) TAT (Tyr) GCT (Ala) CCA (Pro) CAA (Gln) AAT (Asn) ACA (Thr) ATA (Ile) GTA (Val)
 CPV-2c
  HN7AA/MK357734 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATA (Ile) GTA (Val)
  HN4AA/MK357735 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCC (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  N11AA/MK357736 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  HN37AA/K357737 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  HCM4/MK357725 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  HCM16/MK357726 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  HCM22/MK357727 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATA (Ile) GTA (Val)
  HCM25/MK357728 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  HCM27/MK357729 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  HCM32/MK357730 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  HCM48/MK357731 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  HCM50/MK357732 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  DN8/MK357721 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  DN18/MK357722 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)
  DN26/MK357723 GGA (Gly) TTG (Leu) TAT (Tyr) GGT (Gly) ACA (Thr) AAC (Asn) ATT (Ile) GCT (Ala) CCA (Pro) CGA (Arg) GAA (Glu) ACA (Thr) ATG (Met) GTA (Val)