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Table 5 Significant difference expression unigenes of BR and JA pathway

From: Transcriptome analysis of Nicotiana benthamiana infected by Tobacco curly shoot virus

 

Gene symbol

Unigene ID

Protein properties

log2FCa

qvaluea

log2FCb

qvalueb

BR

CYP90C1/D1

Niben101Scf05764g04013

3-epi-6-deoxocathasterone 23-monooxygenase

-0.8193

0.019172

  

BRI1

Niben101Scf13404g00002

Brassinosteroid LRR receptor kinase-like, BRI1

  

-0.8361

2.72E-04

BZR1

Niben101Scf03110g05009

Brassinosteroid resistant 1

0.5592

0.025611

  

BZR2

Niben101Scf06112g01006

Brassinosteroid resistant 2

  

-1.2497

7.36E-07

CYCD3-X1

Niben101Scf05643g01012

Cyclin D3, 3 protein, plant

1.3753

1.44E-07

  

CYCD3-X1

Niben101Scf02445g10017

Cyclin D3, 3 protein, plant

1.2863

0.002511

  

CYCD3-X2

Niben101Scf00107g02002

Cyclin D3, 2 protein, plant

-0.8767

0.017675

-1.2925

2.43E-04

JA

PLA1/A2

Niben101Scf00711g02004

Triacylglycerol lipase SDP1-like; Phospholipase A1/A2

1.8227

0.003036

  

DOX1

Niben101Scf07070g02002

Alpha-dioxygenase

-3.8126

7.60E-13

-3.9498

7.95E-14

loxF

Niben101Scf05407g00001

Linoleate 9S-lipoxygenase-like

0.9407

0.021540

  

HPL1

Niben101Scf00313g08016

Fatty acid hydroperoxide lyase, HPL1

-1.2170

1.14E-09

-0.9629

7.37E-07

HPL1

Niben101Scf02207g11009

Fatty acid hydroperoxide lyase, HPL1

-1.4966

1.06E-05

  

KAT2

Niben101Scf10189g02009

3-ketoacyl-CoA thiolase 2, peroxisomal

  

0.6201

0.007053

SAMT-X1

Niben101Scf05122g00005

Salicylate carboxymethyltransferase-like

-1.4545

2.97E-11

-0.8505

2.96E-04

SAMT-X2

Niben101Scf01146g12006

Salicylate carboxymethyltransferase-like

  

1.6487

0.010833

JAR1

Niben101Scf01076g00005

Jasmonic acid-amino synthetase

-0.6477

0.003456

-0.8340

0.001705

COI1

Niben101Scf02280g08005

Coronatine-insensitive 1, COI1

-0.6123

0.024317

-0.8990

2.81E-04

JAZ1

Niben101Scf00298g01006

Jasmonate ZIM-domain protein 1

0.7577

0.039355

  

JAZ2

Niben101Scf07798g03026

Jasmonate ZIM domain-containing protein

  

0.7728

3.95E-04

MYC2

Niben101Scf15224g00002

Transcription factor MYC2

  

-0.6238

0.042856

  1. log2FC > 0, up-regulated, log2FC < 0, down-regulated. Blank lattices show genes expression has no significant difference
  2. FC Fold change
  3. aY35AB vs. CK
  4. bY35A vs. CK