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Table 5 Significant difference expression unigenes of BR and JA pathway

From: Transcriptome analysis of Nicotiana benthamiana infected by Tobacco curly shoot virus

  Gene symbol Unigene ID Protein properties log2FCa qvaluea log2FCb qvalueb
BR CYP90C1/D1 Niben101Scf05764g04013 3-epi-6-deoxocathasterone 23-monooxygenase -0.8193 0.019172   
BRI1 Niben101Scf13404g00002 Brassinosteroid LRR receptor kinase-like, BRI1    -0.8361 2.72E-04
BZR1 Niben101Scf03110g05009 Brassinosteroid resistant 1 0.5592 0.025611   
BZR2 Niben101Scf06112g01006 Brassinosteroid resistant 2    -1.2497 7.36E-07
CYCD3-X1 Niben101Scf05643g01012 Cyclin D3, 3 protein, plant 1.3753 1.44E-07   
CYCD3-X1 Niben101Scf02445g10017 Cyclin D3, 3 protein, plant 1.2863 0.002511   
CYCD3-X2 Niben101Scf00107g02002 Cyclin D3, 2 protein, plant -0.8767 0.017675 -1.2925 2.43E-04
JA PLA1/A2 Niben101Scf00711g02004 Triacylglycerol lipase SDP1-like; Phospholipase A1/A2 1.8227 0.003036   
DOX1 Niben101Scf07070g02002 Alpha-dioxygenase -3.8126 7.60E-13 -3.9498 7.95E-14
loxF Niben101Scf05407g00001 Linoleate 9S-lipoxygenase-like 0.9407 0.021540   
HPL1 Niben101Scf00313g08016 Fatty acid hydroperoxide lyase, HPL1 -1.2170 1.14E-09 -0.9629 7.37E-07
HPL1 Niben101Scf02207g11009 Fatty acid hydroperoxide lyase, HPL1 -1.4966 1.06E-05   
KAT2 Niben101Scf10189g02009 3-ketoacyl-CoA thiolase 2, peroxisomal    0.6201 0.007053
SAMT-X1 Niben101Scf05122g00005 Salicylate carboxymethyltransferase-like -1.4545 2.97E-11 -0.8505 2.96E-04
SAMT-X2 Niben101Scf01146g12006 Salicylate carboxymethyltransferase-like    1.6487 0.010833
JAR1 Niben101Scf01076g00005 Jasmonic acid-amino synthetase -0.6477 0.003456 -0.8340 0.001705
COI1 Niben101Scf02280g08005 Coronatine-insensitive 1, COI1 -0.6123 0.024317 -0.8990 2.81E-04
JAZ1 Niben101Scf00298g01006 Jasmonate ZIM-domain protein 1 0.7577 0.039355   
JAZ2 Niben101Scf07798g03026 Jasmonate ZIM domain-containing protein    0.7728 3.95E-04
MYC2 Niben101Scf15224g00002 Transcription factor MYC2    -0.6238 0.042856
  1. log2FC > 0, up-regulated, log2FC < 0, down-regulated. Blank lattices show genes expression has no significant difference
  2. FC Fold change
  3. aY35AB vs. CK
  4. bY35A vs. CK