Table 3 PCV3 real-time PCR results and PCV3 sequences
Farm | PCV3 positive pools | Range of Cq values | Obtained PCV3 sequence |
|---|---|---|---|
1 | 0 | NA | NA |
2 | 3/4 | 33–36 | DE2.8p |
3 | 2/4 | 30–33 | DE3.7c |
4 | 2/4 | 31–33 | DE4.3c |
5 | 1/4 | 32 | DE5.15p |
6 | 3/4 | 32–36 | DE6.1p |
7 | 3/4 | 26–38 | DE7.3c |
8 | 1/4 | 32 | NA |
10 | 2/4 | 34–37 | NA |
12 | 3/4 | 27–35 | DE12.19p |
13 | 3/4 | 35–38 | DE13.20c |
14 | 3/4 | 33–36 | DE14.15p |
15 | 2/4 | 32–38 | DE15.19p |
16 | 0 | NA | NA |
17 | 1/4 | 37 | DE17.20p |
18 | 2/4 | 31 | DE18.2c |
19 | 1/4 | 32 | DE19.15c |
20 | 4/4 | 33–38 | NA |
21 | 0 | NA | NA |
22 | 1/4 | 31 | NA |
23 | 2/4 | 31–33 | DE23.17c |
24 | 2/4 | 37–38 | NA |
25 | 0 | NA | NA |
26 | 3/4 | 27–35 | DE26.17c |
27 | 1/4 | 31 | DE27.16c |
28 | 3/4 | 33–37 | DE28.12p |
29 | 1/4 | 36 | NA |
30 | 1/4 | 38 | NA |
31 | 2/4 | 32–37 | DE31.17p |
32 | 0 | NA | NA |
33 | 0 | NA | NA |
34 | 2/4 | 32–35 | DE34.5c |
35 | 1/4 | 36 | NA |
36 | 0 | NA | NA |
37 | 1/4 | 38 | NA |
38 | 0 | NA | NA |
39 | 1/4 | 37 | NA |
40 | 1/4 | 39 | NA |
41 | 1/4 | 30 | DE41.16c |
42 | 0 | NA | NA |
43 | 0 | NA | NA |
44 | 3/4 | 32–36 | NA |
45 | 0 | NA | NA |
46 | 3/4 | 35–36 | NA |
47 | 0 | NA | NA |
48 | 2/4 | 31–37 | DE48.7c |
49 | 2/4 | 33–38 | NA |
50 | 0 | NA | NA |
51 | 1/4 | 34 | NA |
52 | 2/4 | 34–36 | DE52.18c |
53 | 3/4 | 28–34 | DE53.8c |
54 | 2/4 | 35–36 | NA |
55 | 2/4 | 34–37 | DE55.1c |