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Table 3 PCV3 real-time PCR results and PCV3 sequences

From: Full genome characterization of porcine circovirus type 3 isolates reveals the existence of two distinct groups of virus strains

Farm PCV3 positive pools Range of Cq values Obtained PCV3 sequence
1 0 NA NA
2 3/4 33–36 DE2.8p
3 2/4 30–33 DE3.7c
4 2/4 31–33 DE4.3c
5 1/4 32 DE5.15p
6 3/4 32–36 DE6.1p
7 3/4 26–38 DE7.3c
8 1/4 32 NA
10 2/4 34–37 NA
12 3/4 27–35 DE12.19p
13 3/4 35–38 DE13.20c
14 3/4 33–36 DE14.15p
15 2/4 32–38 DE15.19p
16 0 NA NA
17 1/4 37 DE17.20p
18 2/4 31 DE18.2c
19 1/4 32 DE19.15c
20 4/4 33–38 NA
21 0 NA NA
22 1/4 31 NA
23 2/4 31–33 DE23.17c
24 2/4 37–38 NA
25 0 NA NA
26 3/4 27–35 DE26.17c
27 1/4 31 DE27.16c
28 3/4 33–37 DE28.12p
29 1/4 36 NA
30 1/4 38 NA
31 2/4 32–37 DE31.17p
32 0 NA NA
33 0 NA NA
34 2/4 32–35 DE34.5c
35 1/4 36 NA
36 0 NA NA
37 1/4 38 NA
38 0 NA NA
39 1/4 37 NA
40 1/4 39 NA
41 1/4 30 DE41.16c
42 0 NA NA
43 0 NA NA
44 3/4 32–36 NA
45 0 NA NA
46 3/4 35–36 NA
47 0 NA NA
48 2/4 31–37 DE48.7c
49 2/4 33–38 NA
50 0 NA NA
51 1/4 34 NA
52 2/4 34–36 DE52.18c
53 3/4 28–34 DE53.8c
54 2/4 35–36 NA
55 2/4 34–37 DE55.1c
  1. c complete PCV3 genome sequence, p partial PCV3 genome sequence (ORFs 1, 2 & 3 complete), NA not adequate, (Farms 9 and 11 were not included in this study)