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Table 1 Nucleotide differences between the reference NDV and the assembled full-length clone, pFLC-LS1

From: Development of a novel Newcastle disease virus (NDV) neutralization test based on recombinant NDV expressing enhanced green fluorescent protein

Nucleotide Positiona

Nucleotide change

Gene

Observationc

Reference

Full-length clone

4291

A

G

M

Creation of BssHII

4552

CA

GC

F

Creation of NruI

6294

CG

GC

F-HNb

Creation of MluI

8352

CAGCTC

TACGTA

HN-Lb

Creation of SnaBI

8817

A

G

L

per se mutation

9440

T

C

L

per se mutation

11,657

G

A

L

per se mutation

12,567

C

T

L

per se mutation

14,608

T

A

L

Destruction of BbvCI

  1. a Numbering of the nucleotide position is relative to the reference NDV (GenBank sequence no. Y18898)
  2. bIntergenic regions between F and HN or between HN and L genes, respectively
  3. cDifferences in the cDNA sequence were caused by introduction/destruction of artificial restriction sites (in fragments-1 and -2) or per se the genome sequence (in fragment-3)