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Fig. 1 | Virology Journal

Fig. 1

From: The proposed new species, cacao red vein virus, and three previously recognized badnavirus species are associated with cacao swollen shoot disease

Fig. 1

The three types of genome arrangements found among the cacao swollen shoot- badnaviral genome sequences. The predicted coding regions are indicated by filled arrows as: blue = ORF1, orange = ORF2, green = ORF3, pink = ORF4, purple = ORFX, and black = ORFY. a The four ORF-genome arrangement (type I), shown for isolate GH67, was also observed for isolates CI275, GH64 and CI286. b The five ORF-genome arrangement (type II), shown for isolate CIS2, was present among isolates CIS3, CI134, CI135, CIT5, CI44 and CI215. c The six ORF genome arrangement (type III), represented by isolate GH75, was present in isolates CI311 and CI301. The small black arrowhead at the top of each genome map indicates the first nucleotide coordinate, which also is the first 5′-nt of the tRNAmet binding site. Country name and abbreviation: CI (Cote d’Ivoire), GH (Ghana), and TG (Togo) indicating country of sample collection

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Virology Journal

ISSN: 1743-422X