Isolate
|
Major parent
|
Minor parent
|
B-E
|
Software*
|
P-value
|
Z-value#
|
---|
CHBJ1
|
WF1–04
|
WF7–06
|
15–1051
|
GBS3
|
2.07 × 10−18
|
9.7
|
CHBJ2
|
WF1–04
|
WF7–06
|
15–1051
|
GBS3
|
2.07 × 10−18
|
9.65
|
CHK16
|
WF-05
|
R4
|
17–387
|
BMCS3
|
1.028 × 10−14
|
9.43
|
CHK51
|
WF-05
|
R4
|
17–387
|
BMCS3
|
1.028 × 10−14
|
9.38
|
R
|
WF-05
|
R4
|
17–697
|
MCS3
|
1.028 × 10−14
|
8.92
|
R5
|
WF-05
|
R4
|
17–451
|
MCS3
|
1.028 × 10−14
|
10.6
|
WF2–06
|
WF1–04
|
WF7–06
|
15–1051
|
GBS3
|
2.07 × 10−18
|
10.2
|
WF3–06
|
WF1–04
|
WF7–06
|
10–1051
|
GBS3
|
2.07 × 10−18
|
10.2
|
WF3–07
|
WF1–04
|
WF7–06
|
10–1047
|
GBS3
|
2.07 × 10−18
|
10.2
|
WF8–08
|
WF1–04
|
WF7–06
|
10–1051
|
GBS3
|
2.07 × 10−18
|
10.1
|
WF10–07
|
TA15–08
|
WF3–08
|
91–786
|
MCS3
|
1.18 × 10−8
|
7.1
|
WFLB3
|
WF7–06
|
WF1–04
|
377–657
|
GBS3
|
2.07 × 10−18
|
10.6
|
- The recombination crossover sites within CP-UTR of turnip mosaic virus were detected by the recombination detecting programs. The geographical origin of each isolate were showed in Fig. 2
- *The programs supporting recombination event. R(RDP), G (Geneconv), B (Bootscan), M (Maxchi), C (Chimaera), S (Siscan) and 3 (3seq). The analysis was carried out with default settings for the different detection methods and a Bonferroni-corrected cutoff of 0.05. The program that has the greatest P-value was marked in bold. B-E represents the beginning and ending point of recombination