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Table 2 Codon adaptation of BCoV genes in relation to Bos taurus codon usage, displayed as CAIa values

From: Genome-wide analysis of codon usage bias in Bovine Coronavirus

 

CAI-BT

%GC

%GC(1)

%GC(2)

%GC(3)

BCoV genes

0.638 ± 0.002

37.09 ± 0.000

45.86 ± 0.000

37.10 ± 0.000

28.32 ± 0.000

Bos taurus genes

0.756 ± 0.048

51.20 ± 6.803

52.17 ± 5.430

38.39 ± 5.546

63.04 ± 12.957

  1. a CAI codon adaptation index, CAI-BT codon adaptation index in relation to Bos taurus reference codon usage set. %GC, percentage of G + C genomic content, %GC(1) through (3), percentage of G + C genomic content at codon positions 1 through 3, respectively. In all cases, mean ± standard deviation values are shown
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Virology Journal

ISSN: 1743-422X