Table 2 Genetic relatedness between T’Ho virus and select other flaviviruses
Virus | % nucleotide identity (genome) | % nucleotide identity (ORF) | % amino acid identity (polyprotein) |
|---|---|---|---|
Ntaya group viruses | |||
Bagaza virus | 62.6 | 63.5 | 66.0 |
Ilheus virus | 65.9 | 65.8 | 70.6 |
1Rocio virus | 67.4 | 67.3 | 72.2 |
Israel turkey meningoencephalitis virus | 63.3 | 64.0 | 66.3 |
Ntaya virus | 62.9 | 63.6 | 65.2 |
Tembusu virus | 63.0 | 63.4 | 65.3 |
Zika virus | 58.8 | 59.4 | 57.1 |
Japanese encephalitis group viruses | |||
Cacipacore virus | n/a | 62.5 | 63.2 |
Japanese encephalitis virus | 63.5 | 63.8 | 64.7 |
Koutango virus | n/a | 63.4 | 64.0 |
Murray Valley encephalitis virus | 62.8 | 63.3 | 64.4 |
2Alfuy virus | 62.3 | 62.6 | 64.1 |
St. Louis encephalitis virus | 63.7 | 64.1 | 66.3 |
Usutu virus | 63.1 | 63.4 | 64.3 |
West Nile virus | 62.8 | 63.4 | 64.5 |
3Kunjin virus | 62.0 | 62.8 | 64.5 |
Yaounde virus | n/a | 63.8 | 65.5 |
Other flaviviruses | |||
Cell fusing agent virus | 42.1 | 42.0 | 29.2 |
Dengue virus type-2 | 56.4 | 56.9 | 51.7 |
Modoc virus | 50.2 | 48.1 | 38.4 |
Tick-borne encephalitis virus | 48.5 | 49.1 | 41.9 |
Yellow fever virus | 53.4 | 53.7 | 45.8 |