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Table 2 Genetic relatedness between T’Ho virus and select other flaviviruses

From: Complete genome sequence of T’Ho virus, a novel putative flavivirus from the Yucatan Peninsula of Mexico

Virus % nucleotide identity (genome) % nucleotide identity (ORF) % amino acid identity (polyprotein)
Ntaya group viruses
 Bagaza virus 62.6 63.5 66.0
 Ilheus virus 65.9 65.8 70.6
   1Rocio virus 67.4 67.3 72.2
 Israel turkey meningoencephalitis virus 63.3 64.0 66.3
 Ntaya virus 62.9 63.6 65.2
 Tembusu virus 63.0 63.4 65.3
 Zika virus 58.8 59.4 57.1
Japanese encephalitis group viruses
 Cacipacore virus n/a 62.5 63.2
 Japanese encephalitis virus 63.5 63.8 64.7
 Koutango virus n/a 63.4 64.0
 Murray Valley encephalitis virus 62.8 63.3 64.4
   2Alfuy virus 62.3 62.6 64.1
 St. Louis encephalitis virus 63.7 64.1 66.3
 Usutu virus 63.1 63.4 64.3
 West Nile virus 62.8 63.4 64.5
   3Kunjin virus 62.0 62.8 64.5
 Yaounde virus n/a 63.8 65.5
Other flaviviruses
 Cell fusing agent virus 42.1 42.0 29.2
 Dengue virus type-2 56.4 56.9 51.7
 Modoc virus 50.2 48.1 38.4
 Tick-borne encephalitis virus 48.5 49.1 41.9
 Yellow fever virus 53.4 53.7 45.8
  1. 1, 2, 3Subtype of ILHV, MVEV and WNV, respectively
  2. n/a not available (genome has not been fully sequenced)