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Table 1 Lengths of dsRNA segments 1–10, encoded putative proteins, 5′and 3′NCRs of DH13C120 virus genome

From: Isolation of Tibet orbivirus from Culicoides and associated infections in livestock in Yunnan, China

Segment Length (bp) GC% Protein (aa) 5′NCR (bp) Terminal sequence (5′–3′) 3′NCR (bp) Putative function GenBank Accession no.
S1 3950 41.32 1304 11 GUAAAAUCA---AUACACUUAC 24 VP1: RNA-dependent RNA polymerase KU754026
S2 2901 40.09 950 13 GUAAAAAUC---UUAAACUUAC 35 VP2: outer capsid protein; controls virus serotype; most variable protein; contains neutralizing epitopes KU754027
S3 2769 44.42 899 17 GUAAAAUUU---AUACACUUAC 52 VP3(T2): forms sub-core capsid layer KU754028
S4 1978 42.82 643 8 GUAAAAACA---UUACACUUAC 38 VP4: Cap; protein within the sub-core; shows capping activities and methyltransferase type 1 and type 2 activities KU754029
S5 1775 43.83 554 31 GUAAAAAAG---UUACACUUAC 79 NS1: TuP; forms tubules of unknown function within the cytoplasm of infected cells KU754030
S6 1642 43.42 526 31 GUAAAAAGA---UUUCACUUAC 30 VP5: outer capsid protein KU754031
S7 1165 44.72 349 17 GUAAAAAUU---UUACACUUAC 98 VP7(T13): immunodominant major serogroup specific antigen KU754032
S8 1142 41.94 359 20 GUAAAAAAU---UUAAACUUAC 42 NS2: single-stranded RNA-binding protein KU754033
S9 1100 44.73 346 14 GUAAAAAAU---UAAAACUUAC 45 VP6: helicase for unwinding and binding to ssRNA and dsRNA; NTPase KU754034
S10 832 41.47 234 21 GUAAAAAAG---CCCAACUUAC 106 NS3: involved in cell exit; glycoprotein KU754035
   42.59 Consensus GUAAAAA/U---------C/AACUUAC