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Table 3 Percentage identity matrices (nucleotide and deduced amino acid) of VP7

From: First study conducted in Northern India that identifies group C rotavirus as the etiological agent of severe diarrhea in children in Delhi

Strain

    

Human

  

Porcine

Bovine

Human/India

Study Samples

 
 

Bristol

BCN9

OH567

Wu82

BS347

C13

S-1

Cowden

Shintoku

V460

V508

ND-061

ND-240

ND-237

Bristol

 

96.70%

98.20%

98.20%

96.70%

96.30%

98.20%

75.10%

79.00%

96.70%

96.70%

97.10%

98.40%

97.10%

BCN9

90.70%

 

95.30%

95.30%

97.30%

96.90%

95.30%

74.20%

78.60%

97.60%

97.60%

97.70%

98.90%

97.70%

OH567

95.00%

95.80%

 

100.00%

95.70%

95.30%

98.80%

75.50%

79.40%

95.70%

96.10%

96.20%

97.40%

96.20%

Wu82

95.00%

93.80%

100.00%

 

95.70%

95.30%

98.80%

75.50%

79.40%

95.70%

96.10%

96.20%

97.00%

96.20%

BS347

91.90%

93.80%

91.50%

93.30%

 

99.60%

96.10%

75.00%

78.40%

99.20%

98.40%

98.40%

98.60%

98.40%

C13

90.70%

92.60%

93.30%

91.50%

98.70%

 

95.70%

74.60%

78.00%

98.80%

98.00%

98.00%

98.20%

98.00%

S-1

95.00%

95.80%

96.20%

96.20%

90.70%

94.50%

 

75.70%

79.80%

96.10%

96.10%

99.20%

94.80%

99.20%

Cowden

70.70%

73.80%

78.20%

78.20%

76.70%

75.10%

76.50%

 

79.40%

75.10%

75.10%

73.00%

74.10%

73.00%

Shintoku

71.30%

74.40%

70.00%

79.10%

76.90%

75.70%

70.00%

76.90%

 

78.80%

78.20%

77.80%

78.40%

77.80%

V460

94.80%

92.50%

95.40%

95.40%

94.40%

94.00%

96.00%

75.00%

75.40%

 

98.80%

97.60%

97.80%

97.60%

V508

95.10%

97.50%

96.70%

95.70%

97.10%

97.80%

98.30%

77.10%

76.70%

98.70%

 

96.90%

97.10%

96.90%

ND-061

95.50%

97.40%

96.40%

96.40%

96.90%

95.70%

97.60%

75.60%

73.80%

92.50%

90.90%

 

98.20%

100.00%

ND-240

98.80%

97.70%

95.70%

95.80%

95.10%

96.20%

97.00%

75.00%

73.20%

97.90%

96.50%

96.20%

 

98.20%

ND-237

95.50%

97.40%

96.40%

96.40%

96.90%

95.70%

97.60%

75.60%

73.80%

92.50%

90.90%

100.00%

96.50%

 
  1. Identity matrices nucleotide (above the diagonal) and deduced amino acid (below the diagonal) among human, porcine and bovine group C rotaviruses. References strains from different geographical locations are used for the analysis