Table 3 Nucleotide sequence mutation at L2 of 8 HPV-33 isolates
From: L1 and L2 gene polymorphisms in HPV-58 and HPV-33: implications for vaccine design and diagnosis
Sequence pattern | HPV33 L2 Nucleotide sequence | n | Sub-lineages | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4 | 4 | 4 | 4 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | |||
4 | 6 | 8 | 9 | 0 | 0 | 2 | 2 | 2 | 3 | 3 | 4 | |||
3 | 7 | 0 | 0 | 2 | 5 | 2 | 5 | 8 | 1 | 2 | 5 | |||
8 | 1 | 9 | 5 | 6 | 1 | 0 | 7 | 7 | 4 | 4 | 7 | |||
M12732 | G | T | C | C | A | T | C | G | G | G | A | C | ||
KU518344 | - | - | - | - | - | - | T | - | - | - | - | - | 73 | A1 |
KU518345 | - | - | - | - | - | - | T | - | - | A | - | - | 3 | A1 |
KU518346 | - | - | - | - | - | - | T | - | - | - | - | T | 1 | A1 |
KU518347 | - | - | - | - | G | T | - | - | - | - | - | 1 | A1 | |
KU518348 | - | - | - | - | - | A | T | - | - | - | - | - | 8 | A1 |
KU518349 | A | - | - | - | - | - | T | - | - | - | - | - | 6 | A1 |
KU518350 | A | - | A | T | - | - | T | - | - | - | - | - | 3 | A1 |
KU518351 | A | C | - | T | - | - | T | C | A | - | C | - | 6 | A2 |
I | F | D | D | D | N | |||||||||
D | 2 | 2 | 3 | 3 | 3 | 3 | ||||||||
aa mutation | 7 | - | - | - | 7 | 8 | - | 5 | 6 | 6 | 7 | - | 101 | |
7 | 3 | 1 | 0 | 0 | 9 | 2 | ||||||||
N | V | Y | H | N | N | T | ||||||||
second struture | - | S | - | S | - | - | - | - | - | - | - | - | ||