Table 1 Highest nucleotide identities for each gene segment of the novel MRV3/Swine/Italy/224660-4/2015
From: First identification of mammalian orthoreovirus type 3 in diarrheic pigs in Europe
Swine-MRV3 Italy 2015 | % similarity | MRV strain | Serotype | Lineage | Host | Country | GenBank Acession No. |
|---|---|---|---|---|---|---|---|
L1 | 91.9 | T3D | 3 | II | Human | USA | HM159613 |
L2 | 98.9 | T3/Pip. kuhlii/Italy/5515-2/2012 | 3 | III | Bat | Italy | KU194659 |
98.7 | T3/bat/Germany/342/08 | 3 | III | Bat | Germany | JQ412756 | |
98.7 | SI-MRV01 | 3 | III | Human | Slovenia | KF154725 | |
L3 | 93.7 | Abney | 3 | II | Human | USA | GU589579 |
M1 | 91.8 | MRV2 Tou5 | 2 | - | Human | France | GU196309 |
89.6 | SHR-A | 3 | IV | Pig | China | JX415468 | |
M2 | 91.0 | BatMRV1-IT2011 | 1 | - | Bat | Italy | KT900699 |
M3 | 91.4 | BM-100 | 3 | III | Pig | USA | KM820749 |
90.5 | GD-1 | 3 | IV | Pig | China | JX486062 | |
S1 | 98.4 | SI-MRV01 | 3 | III | Human | Slovenia | KF154730 |
98.2 | T3/Pip. kuhlii/Italy/5515-2/2012 | 3 | III | Bat | Italy | JQ979272 | |
97.7 | T3/bat/Germany/342/08 | 3 | III | Bat | Germany | JQ412761 | |
S2 | 93.7 | T1 Lang | 1 | - | Human | USA | L19774 |
92.4 | T3 Abney | 3 | II | Human | USA | GU589584 | |
S3 | 93.9 | T3/bovine/Maryland /cl. 31/1959 | 3 | III | Bovine | USA | U35357 |
92.4 | FS03 | 3 | III | Pig | USA | KM820762 | |
S4 | 94.5 | SHR-A | 3 | IV | Pig | China | JX415473 |