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Table 2 Numbers of DEGs of top 18 KEGG pathways

From: Transcriptome analysis of woodland strawberry (Fragaria vesca) response to the infection by Strawberry vein banding virus (SVBV)

Pathway

DEGs with pathway annotation (55)

Pathway ID

P-value

DNA replication

6 (10.9 %)

ko03030

3.26E-05

Plant-pathogen interaction

5 (9.09 %)

ko04626

0.016313

Homologous recombination

3 (5.45 %)

ko03440

0.038149

Pyrimidine metabolism

3 (5.45 %)

ko00240

0.054767

Glycerophospholipid metabolism

2 (3.63 %)

ko00564

0.062874

Cysteine and methionine metabolism

2 (3.63 %)

ko00270

0.124652

Carotenoid biosynthesis

2 (3.63 %)

ko00906

0.134477

Flavonoid biosynthesis

2 (3.63 %)

ko00941

0.139119

Mismatch repair

2 (3.63 %)

ko03430

0.180901

Starch and sucrose metabolism

2 (3.63 %)

ko00500

0.181124

Nucleotide excision repair

2 (3.63 %)

ko03420

0.221115

RNA transport

2 (3.63 %)

ko03013

0.235493

Alanine, aspartate and glutamate metabolism

2 (3.63 %)

ko00250

0.241640

Plant hormone signal transduction

2 (3.63 %)

ko04075

0.246704

Purine metabolism

2 (3.63 %)

ko00230

0.283547

Ubiquitin mediated proteolysis

2 (3.63 %)

ko04120

0.283547

Protein processing in endoplasmic reticulum

2 (3.63 %)

ko04141

0.295430

Glutathione metabolism

2 (3.63 %)

ko00480

0.303477