Table 1 Genome comparison of ZLCV isolates
From: The complete genome of the tospovirus Zucchini lethal chlorosis virus
ZLCV-SP | ZLCV-DF | |
|---|---|---|
L RNA | ||
L RNA full length (nt) | 8885 | 8886 |
5’UTR (nt) | 222 (1–222)a | 223 (1–223) |
L gene ORF (nt) | 8631 (223–8853) | 8631 (224–8854) |
L protein (aa) | 2877 (330.85 kDa) | 2877 (331.16 kDa) |
3’UTR (nt) | 32 (8854–8885) | 32 (8855–8886) |
M RNA | ||
M RNA full length (nt) | 4860 | 4829 |
5’UTR (nt) | 113 (1–113) | 113 (1–113) |
NSm gene ORF (nt) | 909 (114–1022) | 909 (114–1022) |
NSm protein (aa) | 303 (34.4 kDa) | 303 (34,37 kDa) |
IGR (nt) | 344 (1023–1366) | 313 (1–1335) |
GPs gene ORF (nt) | 3408 (1367–4774) | 3408 (1336–4743) |
GP protein (aa) | 1136 (127.58 kDa) | 1136 (127.73 kDa) |
3’UTR (nt) | 86 (4775–4860) | 86 (4744–4829) |
S RNA | ||
S RNA full length (nt) | 3524 | 3524 |
5’UTR (nt) | 87 (1–87) | 87 (1–87) |
NSs gene ORF (nt) | 1404 (88–1491) | 1404 (88–1491) |
NSs protein (aa) | 468 (53.06 kDa) | 468 (53.01 kDa) |
IGR (nt) | 1009 (1492–2500) | 1009 (1492–2500) |
NP gene ORF (nt) | 783 (2501–3283) | 783 (2501–3283) |
NP protein (aa) | 261 (29.22 kDa) | 261 (29.24 kDa) |
3’UTR (nt) | 241 (3284–3524) | 241 (3284–3524) |