Table 4 Predicted transmembrane amino acid sequences analysis for HN gene of thermostable ND-viruses and vaccine strains

NDV/UG/MU/007

NDV/UG/MU/010

NDV/UG/MU/022

NDV/UG/MU/039

NDV/UG/MU/059

NDV/UG/MU/111

24

47

1.7

24

VFRIAVLSLIIMILVISVSILVYS

25

46

2.2^a

22

96

97

1.7

2

LL

101

105

1.7

5

STIMN

557

563

1.7

7

RIVPLLV

NDV/UG/MU/098

24

47

1.7

24

VFRIAVLSLIIMILVISVSILVYS

25

46

2.2^a

22

FRIAVLSLIIMILVISVSILV

96

97

1.7

2

LL

101

104

1.7

4

SVIM

557

563

1.7

7

RIVPLLV

LaSota Thermolabile strain

23

47

1.7

25

IFRIAILFLTVVTLAISVASLLYS

25

45

2.2^a

21

FRIAILFLTVVTLAISVASLL

209

210

1.7

2

GV

557

563

1.7

7

TTIMN

I-2 Thermostable strain

23

44

1.7

22

VFRIAILFLTVVTLAVSAAALAYS

25

42

2.2^a

18

FRIAILFLTVVTLAVSAAALA

424

429

1.7

6

ALLYPM

557

563

1.7

7

RIVPLLV

NDV4-C Thermostable

24

44

1.7

21

VFRIAILLSTVVTLAISAAAL

25

42

2.2^a

18

FRIAILLSTVVTLAISAA

210

210

1.7

1

L

424

430

1.7

7

ALLYMI

557

563

1.7

7

RIVPLLV

NDV TS09-C thermostable

24

44

1.7

21

VFRIAILLSTVVTLAISAAAL

25

42

2.2^a

18

FRIAILLSTVVTLAISAA

210

211

1.7

2

VL

424

430

1.7

7

ALLYPMI

557

563

1.7

7

RIVPLLV

NDV B1 strain

24

47

1.7

24

VFRIAILLSTVVTLAISAAALAYS

25

45

2.2^a

21

FRIAILLSTVVTLAISAAALA

557

563

1.7

7

RIVPLLV