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Table 3 Genetic distance among HCoV-OC43 and HCoV-HKU1 genotypes in the spike gene

From: Molecular epidemiology and evolutionary histories of human coronavirus OC43 and HKU1 among patients with upper respiratory tract infections in Kuala Lumpur, Malaysia

 

HCoV

Genetic distance

OC43

 

genotype A

genotype B

genotype C

genotype D

genotype E

Novel lineage 1

Novel lineage 2

 

genotype A

-

      
 

genotype B

2.7

-

     
 

genotype C

2.2

1.5

-

    
 

genotype D

2.7

1.8

0.8

-

   
 

genotype E

2.5

0.9

1.2

1.6

-

  
 

Novel lineage 1

3.2

2.0

1.3

0.7

1.9

-

 
 

Novel lineage 2

3.1

2.9

1.8

1.4

2.6

1.7

-

HKU1

 

genotype A

genotype B

genotype C

    
 

genotype A

-

      
 

genotype B

15.7

-

     
 

genotype C

15.2

1.3

-

    
  1. Pairwise genetic distances are expressed in percentage (%) difference
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Virology Journal

ISSN: 1743-422X