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Table 2 Molecular diversity of RNA L, M and S for TSWV isolates worldwide

From: Identification of three new isolates of Tomato spotted wilt virus from different hosts in China: molecular diversity, phylogenetic and recombination analyses

 

RNA L

RNA M

RNA S

Genome size

8897–8917 (20)

4752–4830 (78)

2916–3364 (448)

ORF1

8628–8643 (15)

909 (0)

1200–1404 (204)

ORF2

None

3408 (0)

777 (0)

5′UTR

33–34 (1)

99–100 (1)

86–90 (4)

3′UTR

236–243 (7)

84–98 (14)

151–153 (2)

IGR

None

251–329 (78)

500–943 (443)

  1. Values in brackets indicate the range of size variations (in nucleotides). ORF1 encodes the RdRp in RNA L, NSm is encoded by RNA M and NSs is encoded by RNA S. ORF2 encodes Gn-Gc in RNA M and N in RNA S. BD172070 (RNA L), HQ839730 (RNA S) and DQ431238 (RNA S) were not included in this analysis (Additional file 1: Table S1)
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Virology Journal

ISSN: 1743-422X