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Table 1 Oligonucleotides used in this study

From: Analysis of the interaction between host factor Sam68 and viral elements during foot-and-mouth disease virus infections

Primer Name

Sequence

P-Q180AForward Sam68

GGGGAAGATTCTTGGACCAGCCGGGAATACAATCAAAAGAC

P-Q180A-Reverse Sam68

GTCTTTTGATTGTATTCCCGGCTGGTCCAAGAATCTTCCCC

P-Q391A-Forward Sam68

GAAGGCTATTACAGCCAGAGTGCCGGGGACTCAGAATATTATGAC

P-Q391A-Reverse Sam68

GTCATAATATTCTGAGTCCCCGGCACTCTGGCTGTAATAGCCTTC

P1579 S IRES -T7

GGATAATACGACTCACTATAGGTTTTCATGAGAAATGGGACGTCTG

P1580 AS IRES

CCTTCCTGTGGCTCGTGGTAGG

P1329 S A24-T7cre

GGATAATACGACTCACTATAGGGCTTGAGGAGGACTTG

P1330 AS A24-cre

GTCAGTTGGGGAAACCTGCTT

P-21036-IRES loop 1- T7

GATAATACGACTCACTATAGGTTTTCATGAGAAATGGG

P-21037-IRES loop 1 Rev

CTGCTTAGATCGTG

P-1584-IRES loop 2 For-T7

GATAATACGACTCACTATAGGCAAACCGTGCAATTTG

P-1585-IRES loop 2 Rev

GTACAAAGTGTCACCCCTCTAGACCTGG

P-21034-IRES loop 3 For -T7

GGATAATACGACTCACTATAGGGTGTTTGACTCCACGTTCG

P-21035-IRES loop 3 Rev

GCCTGTCACCAGTGCTTGAGTACCAG

P-1581-IRES-4 For -T7

GGATAATACGACTCACTATAGGGACAGGCTAAGGATGCCCTT

P-1582-IRES-4 Rev

ATTCAGACATAGAAGCTTTTTAAACCGGGCG

WT domain 4 probe

5′Biotin-AAGGGGACCGGGGCUUCUAUAAAAGCGCCCGGUUUAAAAAGCUUCUAUGUCUGAAUAGGUGACCG-3′

Mut domain 4 probe

5′Biotin-AAGGGGACCGGGGCUUCUAUACGAGCGCCCGGUUUACGAAGCUUCUAUGUCUGAAUAGGUGACCG-3′

P-2182-Infusion-FMDV A24 ires For

GCTTTCCAGGTCTAGAGGGGTGACACTTTGTACTG

P-2183-Infusion-FMDVa24 ires Rev

GGTTGTTGGGTCTAGAATAGAACACTTTTCTCTCACC