Fig. 3

Phylogenetic analysis of nucleotide sequences for the whole genome of representative geminivirus members. The evolutionary history was inferred using the neighbor-joining method. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) is shown next to the branches. Evolutionary distances were computed using the maximum composite likelihood method and given as the number of base substitutions per site. The analysis involved 32 nucleotide sequences. All positions containing gaps and missing data were eliminated. Evolutionary analyses were done in MEGA6 [13]