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Table 2 Sources of pathogens analyzed and H10-RT-LAMP assay results

From: Reverse-transcription, loop-mediated isothermal amplification assay for the sensitive and rapid detection of H10 subtype avian influenza viruses

Number Virus strain Source Titre H10-RT-LAMP GenBank accession or laboratory references
1 A/duck/Guangxi/030D/2009 (H1N1) GVRI 105.5EID50/mL - KC608160
2 A/duck/Guangxi/N42/2009 (H3N2) GVRI 105.4EID50/mL - JN003630
3 A/duck/Guangxi/GXd-4/2009 (H6N6) GVRI 106.8EID50/mL - JX304746.1
4 A/turkey/Ontario/6118/1967 (H8N4) UCONN 106.3EID50/mL - GU053171.1
5 A/duck/Guangxi/RX/2009 (H9N2) GVRI 106.9EID50/mL - KF768236.1
6 A/duck/Guangxi/LAD9/2009 (H9N8) GVRI 107.1EID50/mL - KF768214.1
7 A/Turkey/MN/3/1979 (H10N7) UCONN 106.7EID50/mL + GU186627.2
8 A/duck/Alberta/60/1976 (H12N5) UCONN 106.3EID50/mL - AB288334
9 A/gull/Maryland/704/1977 (H13N6) UCONN 106.5EID50/mL - D90308.1
10 A/mallard duck/Astrakhan/263/1982 (H14N5) UCONN 106.2EID50/mL - CY014604.1
11 A/wedge-tailed shearwater/Western Australia/2576/1979 (H15N9) UCONN 105.4EID50/mL - CY006010.1
12 A/shorebird/Delaware/168/2006(H16N3) UCONN 106.0EID50/mL - EU030976.1
13 Newcastle disease virus (NDV): Lasota GVRI 108.0EID50/mL - JF950510.1
14 Infectious bronchitis virus (IBV): M41 GVRI 108.3EID50/mL - DQ834384
15 Infectious laryngotracheitis virus (ILTV) GVRI 105.8EID50/mL - NC_006623.1
16 A/Mallard/Alberta/77 (H2N3) UCONN 106.0EID50/mL - Peng Y et al. (2011) [19]
17 A/Turkey/GA/209092/02 (H5N2) UCONN 107.8EID50/mL - Peng Y et al. (2011) [19]
18 A/Turkey/CA/35621/84 (H5N3) UCONN 106.5EID50/mL - Peng Y et al. (2011) [19]
19 A/waterfowl/GA/269452-56/03 (H5N7) UCONN 107.0EID50/mL - Peng Y et al. (2011) [19]
20 A/Turkey/WI/68 (H5N9) UCONN 107.2EID50/mL - Peng Y et al. (2011) [19]
21 A/Chicken/NY/273874/03 (H7N2) UCONN 107.0EID50/mL - Peng Y et al. (2011) [19]
22 A/Duck/HK/876/80 (H10N3) HKU 106.0EID50/mL + Xie Z et al. (2006) [16]
23 A/Chicken/Guangxi/90C/2011 (H1N2) GVRI 106.3EID50/mL - HA and HI test
24 A/Duck/Guangxi/070D/2010 (H4N6) GVRI 106.2EID50/mL - HA and HI test
25 A/chicken PA/3979/97 (H7N2) PU 106.6EID50/mL - HA and HI test
26 A/duck/PA/2099/12 (H11N9) PU 106.0EID50/mL - HA and HI test
27 A/Guangxi/1415/15 (H1N1) GXCDC 105.8EID50/mL - HA and HI test
28 A/Guangxi/1241/14 (H1N1) GXCDC 106.0EID50/mL - HA and HI test
29 A/Guangxi/1420 /15 (H3N2) GXCDC 105.6EID50/mL - HA and HI test
30 A/Guangxi/1632/15 (H3N2) GXCDC 106.2EID50/mL - HA and HI test
31 B/Guangxi/1418/15 GXCDC 105.8EID50/mL - HA and HI test
32 B/Guangxi/1470/15 GXCDC 105.6EID50/mL - HA and HI test
  1. GVRI Guangxi Veterinary Research Institute, Nanning, Guangxi, China; UCONN University of Connecticut, USA; PU University of Pennsylvania, USA; HKU University of Hong Kong, China; GXCDC Guangxi Provincial Center for Disease Control and Prevention, China