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Table 2 Distribution of resistance-associated mutations among 15 patients with viral loads > 1000 copies/ml, at 3–12 months after ART initiation

From: High level of HIV-1 drug resistance among patients with HIV-1 and HIV-1/2 dual infections in Guinea-Bissau

Patient

Sex

HIV type

HIV-1 subtype

Initial CD4

Baseline viral load

ART

Time from ART to re-sistance test (days)

NNRTI resistance

NRTI resistance

PI resistance

Predicted resistance to the following agents

1

M

HIV-1

CRF02_AG

32

132,355

AZT + 3TC + EFV

319

K103N

M184M/V

None

EFV/NVP, 3TC/FTC.

2

F

HIV-1

CRF02_AG

33

61,978

AZT + 3TC + NVP

362

K103N Y188CY

None

L10I/V/F/R/Y

EFV/NVP. Resistance to most PIs when present with other mutations.

3

F

HIV-1/2

CRF02_AG

279

11,348

AZT + 3TC + IND/r

177

None

None

None

None

4

M

HIV-1/2

CRF02_AG

50

360,158

AZT + 3TC + IND/r

161

K101E

None

K20R/M/I/T/V

Intermediate NVP. Low-level ETR, RPV, EFV. Potentially low-level NFV resistance.

5

M

HIV-1

CRF02_AG

207

55,650

AZT + 3TC + EFV

114

None

None

None

None

6

M

HIV-1

CRF02_AG

46

360,978

AZT + 3TC + EFV

203

K103N K101E/K

M184MV

None

High-level 3TC/FTC.

Low-level ddI, ABC.

High-level EFV/NVP.

Low-level EFV, ETR, RPV.

7

F

HIV-1

A

40

216,270

AZT + 3TC + NVP

126

K103N

M184V

L10I/V/F/R/Y

High-level 3TC/FTC.

High-level EFV/NVP.

Resistance to most PIs when present with other mutations.

8

F

HIV-1/2

CRF02_AG

258

46,763

AZT + 3TC + IND/r

189

None

None

None

None.

9

M

HIV-1

CRF02_AG

159

869,295

AZT + 3TC + EFV

281

None

None

None

None.

10

F

HIV-1

CRF02_AG

94

485,983

AZT + 3TC + NVP

98

V106A Y188C

None

K20R/M/I/T/V

High-level NVP, low-level EFV. Potentially low-level NFV resistance.

11

F

HIV-1

CRF02_AG

149

212,560

AZT + 3TC + NVP

344

K103N

None

None

High-level EFV/NVP.

12

M

HIV-1

CRF02_AG

107

34,698

AZT + 3TC + EFV

193

None

M184MV M184 V/I

K20R/M/I/T/V

High-level 3TC/FTC.

Low-level ABC, ddI. Potentially low-level NFV resistance.

13

F

HIV-1

A

71

25,000,000

D4T + 3TC + NVP

98

Y181C

T69D

L10I/V/R/Y

Low-level ddI.

High-level NVP.

Resistance to most PIs when present with other mutations.

14

M

HIV-1

CRF02_AG

147

185

AZT + 3TC + NVP

91

None

None

L33F

Contributed resistance to FPV/r, DRV/r, LPV/r, ATV/r, TPV/r.

15

M

HIV-1

CRF02_AG

252

Un-detectable

AZT + 3TC + EFV

185

None

None

None

None.

  1. M: Male, F: Female, AZT: Zidovudine, D4T: Stavudine, 3TC: Lamivudine, NVP: Nevirapine, EFV: Efavirenz, IND/r: Ritonavir-boosted indinavir, ABC: Abacavir, ddI: Didanosine, FPV: Fosamprenavir, DRV: Darunavir, LPV: Lopinavir, ATV: Atazanavir, TPV: Tipranavir, NFV: Nelfinavir, ETR: Etravirine, RPV: Rilpivirine.