Table 4 Nucleotide (NT) and amino acid (AA) identity of DENV-1-Jeddah-1-2011 E gene compared to closely related isolates
Strain | NT identity (%) | AA identity (%) |
|---|---|---|
AM746214-Jeddah-SA-2005 | 99.7 | 99.8 |
AM746213-Jeddah-SA-2006 | 99.7 | 99.8 |
AM746216-Jeddah-SA-2004 | 99.5 | 99.6 |
AM746215-Jeddah-SA-2005 | 99.5 | 99.6 |
AM746212-Jeddah-SA-2006 | 99.4 | 99.6 |
AF298808-Djibouti-1998 | 98.7 | 99.5 |
AM746217-Jeddah-SA-2004 | 98.0 | 99.1 |
JN029818-China-2010 | 97.7 | 99.3 |
KC848580-Somalia-2011 | 97.5 | 99.1 |
AF350498-China-2001 | 97.1 | 98.5 |
KC848578-Somalia-2011 | 97.1 | 98.9 |
JN415511-Malaysia-2005 | 95.6 | 98.1 |
AB111077-Japan-2002 | 95.5 | 98.1 |
JN415496-Cambodia-2007 | 95.4 | 97.9 |
JN029807-China-2010 | 95.3 | 98.3 |
JQ993203-Thailand-2006 | 95.3 | 97.7 |
AB111076-Japan-2002 | 95.3 | 97.5 |
JQ403519-Taiwan-2009 | 95.2 | 97.9 |
KC861979-Vietnam-2002 | 95.2 | 98.1 |
JQ993204-Thailand-2007 | 95.2 | 98.1 |
JF967810-Myanmar-2008 | 95.1 | 97.5 |
JF967952-Cambodia-2010 | 95.0 | 97.9 |
JF967840-Myanmar-2008 | 94.9 | 97.7 |
JN415531-Australia-2008 | 94.8 | 97.7 |
JN415521-Singapore-2008 | 94.8 | 97.5 |
KC861978-Vietnam-2006 | 94.7 | 97.3 |
JQ403521-Taiwan-2010 | 94.7 | 98.1 |
KC589009-Indonesia-2012 | 94.6 | 97.9 |
JF967824-Singapore-2008 | 94.6 | 97.5 |
KC589010-Indonesia-2012 | 91.7 | 96.7 |
KF672791-Brazil-1991 | 91.5 | 97.1 |
KC812277-Peurto Rico-1998 | 91.3 | 96.9 |
AF425625-Nigeria-1968 | 91.3 | 96.3 |
KF672792-Brazil-1999 | 91.2 | 97.1 |
KC182085-Laos-2008 | 91.1 | 92.5 |
JN415486-India-2010 | 91.1 | 96.9 |
AM746220-Jeddah-SA-1994 | 91.1 | 96.7 |
AM746219-Jeddah-SA-1994 | 91.1 | 96.7 |
AM746218-Jeddah-SA-1994 | 91.1 | 96.7 |
EF654110-South Korea-2006 | 91.0 | 97.3 |
JN036371-Bangladesh-2009 | 91.0 | 96.7 |
JN415524-Sri Lanka-2004 | 90.9 | 96.9 |
JN415516-Philippines2005 | 90.9 | 96.7 |
JN415507-India-2008 | 90.9 | 96.5 |
JX402212-Peurto Rico-2010 | 90.9 | 97.1 |
JN415517-Philippines-2010 | 90.8 | 96.9 |
JQ920432-Mexico-2010 | 90.7 | 96.7 |
JN415513-Malaysia-2010 | 90.5 | 96.9 |
JN415500-East Timor-2008 | 90.5 | 97.1 |
JQ920431-Mexico-2010 | 90.5 | 96.7 |
JF804024-French Polynesia-2001 | 90.5 | 92.5 |
JN415532-Australia-2009 | 90.4 | 97.1 |
JN415502-East Timor-2010 | 90.4 | 97.1 |
JF800928-Nepal-2010 | 90.3 | 96.1 |
EF654104-South Korea-2004 | 90.3 | 96.1 |
KC182103-Laos-2008 | 86.4 | 88.0 |
JN036391-Bangladesh-2006 | 69.9 | 76.5 |