Table 1 Nucleotide (NT) and amino acid (AA) identity of DENV-1-Jeddah-1-2011 full genome compared to closely related strains
Strain | NT identity (%) | AA identity (%) |
|---|---|---|
AF298808-Djibouti-1998 | 97.2 | 99.4 |
JN638336-Thailand-1986 | 97.1 | 99.2 |
AB608788-Taiwan-1994 | 96.7 | 99.0 |
AF350498-China-2001 | 96.6 | 98.1 |
AY726555-Myanmar-1998 | 96.0 | 98.8 |
FJ469907-Singapore-2003 | 94.8 | 98.5 |
JN697058-Malaysia-2005 | 94.4 | 98.4 |
JN697057-Malaysia-2005 | 94.4 | 98.3 |
JN054255-SriLanka-2010 | 94.2 | 97.6 |
GQ398255-Singapore-2008 | 94.2 | 98.3 |
JN054256-SriLanka-2009 | 94.1 | 98.0 |
KF887994-Thailand-2013 | 94.1 | 98.0 |
AB074760-Japan-2001 | 93.9 | 97.5 |
KC759167-China-2012 | 93.8 | 97.7 |
JF459993-Myanmar-2002 | 93.5 | 98.2 |
KF955446-Vietnam-2008 | 92.9 | 96.5 |
AB074761-Japan-2001 | 91.5 | 97.6 |
AB189121-Indonesia-1998 | 91.2 | 97.3 |
AB189120-Indonesia-1998 | 91.2 | 97.5 |
KF184975-Angola-2013 | 91.1 | 97.0 |
FJ744701-Venezuela-2004 | 91.1 | 97.2 |
GQ868602-Phillipines-2004 | 91.1 | 97.4 |
JQ915076-French Polynesia:Tahiti-2009 | 90.8 | 97.3 |
JQ915074-French Polynesia:Moorea-2008 | 90.8 | 97.3 |
FJ850113-Nicaragua-2005 | 90.7 | 97.1 |
JX669475-Brazil-2002 | 90.6 | 97.0 |
JX669473-Brazil-2001 | 90.6 | 97.0 |
FJ810415-Venezuela-2005 | 90.6 | 97.1 |
JN903578-India-2007 | 90.6 | 97.0 |
FJ850114-Nicaragua-2005 | 90.4 | 97.0 |
KJ189368-Mexico-2012 | 90.2 | 96.9 |
JN903579-India-2008 | 90.2 | 96.8 |
KJ189369-Mexico-2011 | 90.0 | 97.1 |
KJ189366-Peurto Rico-2010 | 89.9 | 96.7 |
KJ189304-Colombia-2005 | 89.9 | 97.1 |
KJ189303-Colombia-1998 | 89.9 | 97.1 |
KJ189367-Peurto Rico-2010 | 89.8 | 96.9 |
KF921948-Vietnam-2008 | 89.6 | 97.6 |