Table 2 Pairwise distance between samples
From: Natural transmission of feline immunodeficiency virus from infected queen to kitten
gag CA | RJ34 Tomcat 1 | RJ35 Tomcat 2 | RJ36 Kitten | RJ47 |
|---|---|---|---|---|
RJ34 Tomcat 1 | ||||
RJ35 Tomcat 2 | 0.0% | |||
RJ36 Kitten | 0.0% | 0.0% | ||
RJ47 | 0.3% | 0.3% | 0.3% | |
RJ48 Queen | 0.0% | 0.0% | 0.0% | 0.3% |
pol RT | ||||
RJ34 Tomcat 1 | ||||
RJ35 Tomcat 2 | 0.0% | |||
RJ36 Kitten | 0.5% | 0.5% | ||
RJ47 | 1.3% | 1.3% | 0.7% | |
RJ48 Queen | 0.5% | 0.5% | 0% | 0.7% |
env V3-V4 | ||||
RJ34 Tomcat 1 | ||||
RJ35 Tomcat 2 | 0.0% | |||
RJ36 Kitten | 0.4% | 0.4% | ||
RJ47 | 1.0% | 1.0% | 0.8% | |
RJ48 Queen | 0.6% | 0.6% | 0.2% | 1.0% |