Virology Journal

Table 1 Values for parameters assigned to each amino acid

From: Subtype- and antigenic site-specific differences in biophysical influences on evolution of influenza virus hemagglutinin

aa	A	R	N	D	C	Q	E	G	H	I	L
∆ASA _tot ^a	54.6	199.6	112.9	99.4	92	122.3	124.5	0	144.9	135.9	143.8
∆ASA _np	62.9	85.3	28.5	42.2	40.8	46.7	55.9	25.7	99.5	139.5	144.4
∆ASA _pol	28.7	151.3	113.3	87	96.1	110.1	103.6	28.7	74.1	28.7	28.7
Q ^b	0	1.00	0	−1.00	−0.11	0	−1.00	0	0.05	0	0
aa	K	M	F	P	S	T	W	Y	V	Deleted/missing ^c
∆ASA _tot	155.6	158	172	90.7	71.7	105.4	222.4	190.2	105.6	300
∆ASA _np	122.4	122.1	172	100.8	44.2	74.8	200.5	154.3	113	258.3
∆ASA _pol	70.3	73	28.7	15.6	64.4	63.4	52.4	71.6	26.2	64.4
Q	1.00	0	0	0	0	0	0	0	0	0

^aValues for ΔASA_tot,ΔASA_np, and ΔASA_pol as in [21]. Note that values for ΔASA_tot are all based on comparison to the surface area of glycine, which is set to 0.
^bCalculated at pH 7.0, setting completely ionized acids and bases at −1.00 and 1.00, respectively.
^cValues for deleted or missing amino acids were chosen arbitrarily.

Back to article page

ISSN: 1743-422X

Contact us

Submission enquiries: journalsubmissions@springernature.com