Table 1 Background information of selected strains/isolates of JEV referenced in this study

Nakayama

Japan, 1935

Human brain

III

U70413

JaGAr01

Japan, 1959

Mosquito

III

AF069076

JaoArS982

Japan, 1982

Mosquito

III

M18370

Ishikawa

Japan, 1998

Mosquito

I

AB051292

JaNAr0102

Japan, 2002

Mosquito

I

AY377577

Fu

Australia,1995

Human

II

AF217620

WTP-70-22

Malaysia ,1970

Mosquito

II

U70421

PhAn1242

Philipines,1984

Pig serum

III

U70417

Muar

Malaysia, 1952

Human

V

HM596272

691004

Srilanka, 1969

Human

III

Z34097

H49778

Srilanka, 1987

Human

III

U70395

DH20

Nepal, 1985

Human

III

U03690

VN118

Vietnam, 1979

Mosquito

III

U70420

K94P05

Korea, 1994

Mosquito

I

AF045551

KV1899

Korea, 1999

Pig

I

AY316157

K91P55

Korea, 1991

Mosquito

I

U34928

GP78

India, 1978

Human

III

AF075723

733913

India, 1973

Human brain

III

Z34095

P20778

India, 1958

Human

III

Z34096

R53567

India, unavailable

unavailable

III

U70418

782219

India, 1982

Human

III

U70402

826309

India, 1982

Human brain

III

U70403

R53567

India, unavailable

unavailable

III

U70418

014178

India, 2001

Human blood

III

EF623987

04940-4

India, 2002

Mosquito

III

EF623989

057434

India, 2005

Human blood

III

EF623988

78124

India, 1978

Human

III

U70387

JEV-GKP-0945054

India, 2009

Human CSF

I

HM156572

P3

China, 1949

Mosquito

III

U47032

SA14

China, 1958

Mosquito

III

U14163

SA14-14-2

China, unavailable

Vaccine

III

D90195

GZ04-36

China, 2004

Mosquito

III

DQ404112

XZ0934

China, 2009

Mosquito

V

JF915894

SH-53

China, 2001

Mosquito

I

AY555757

JKT1749

Indonesia, 1979

Mosquito

II

U70405

JKT9092

Indonesia, 1981

Mosquito

IV

U70409

JKT7003

Indonesia, 1981

Mosquito

IV

U70408

JKT5441

Indonesia, 1981

Mosquito

II

U70406

2372

Thailand, 1979

Human

I

U70401

Chiang Mai

Thailand, 1964

Human

III

U70393

HK8256

Taiwan, 1972

Mosquito

III

U03691

IND/10/WB

India, 2010

Human CSF

III

JN189785

IND/10/WB/JEV28

Midnapore, India, 2010

Human CSF

I

JN703381

IND/10/WB/JEV21

Midnapore, India, 2010

Human CSF

I

JN703382

IND/10/WB/JEV38

South 24 Pgs, West Bengal, India, 2010

Human CSF

III

JN968470

IND/10/WB/JEV37

Hooghly, West Bengal, India, 2010

Human serum

III

JN968471

IND/10/WB/JEV44

Malda, West Bengal, India, 2010

Human CSF

III

JN968468

IND/10/WB/JEV41

Malda, West Bengal, India, 2010

Human CSF

III

JN968469

IND/10/WB/JEV40

Howrah, West Bengal, India, 2010

Human CSF

III

JN968472

IND/10/WB/JEV39

Birbhum, West Bengal, India, 2010

Human CSF

III

JN968473

IND/10/WB/JEV42

Murshidabad, West Bengal, India, 2010

Human serum

III

JN968474

IND/10/WB/JEV43

Murshidabad, West Bengal, India, 2010

Human serum

III

JN968475

IND/10/WB/JEV35

Nadia, West Bengal, India, 2010

Human serum

III

JN968476

IND/10/WB/JEV36

Nadia, West Bengal, India, 2010

Human serum

III

JN968477

MVEV-1-51

Australia, 1951

Human

AF161266