Skip to main content

Advertisement

Table 1 Background information of selected strains/isolates of JEV referenced in this study

From: Molecular evidence for the occurrence of Japanese encephalitis virus genotype I and III infection associated with acute Encephalitis in Patients of West Bengal, India, 2010

Strains/isolates Country and Year of isolation Source Genotype GenBank Accession no.
Nakayama Japan, 1935 Human brain III U70413
JaGAr01 Japan, 1959 Mosquito III AF069076
JaoArS982 Japan, 1982 Mosquito III M18370
Ishikawa Japan, 1998 Mosquito I AB051292
JaNAr0102 Japan, 2002 Mosquito I AY377577
Fu Australia,1995 Human II AF217620
WTP-70-22 Malaysia ,1970 Mosquito II U70421
PhAn1242 Philipines,1984 Pig serum III U70417
Muar Malaysia, 1952 Human V HM596272
691004 Srilanka, 1969 Human III Z34097
H49778 Srilanka, 1987 Human III U70395
DH20 Nepal, 1985 Human III U03690
VN118 Vietnam, 1979 Mosquito III U70420
K94P05 Korea, 1994 Mosquito I AF045551
KV1899 Korea, 1999 Pig I AY316157
K91P55 Korea, 1991 Mosquito I U34928
GP78 India, 1978 Human III AF075723
733913 India, 1973 Human brain III Z34095
P20778 India, 1958 Human III Z34096
R53567 India, unavailable unavailable III U70418
782219 India, 1982 Human III U70402
826309 India, 1982 Human brain III U70403
R53567 India, unavailable unavailable III U70418
014178 India, 2001 Human blood III EF623987
04940-4 India, 2002 Mosquito III EF623989
057434 India, 2005 Human blood III EF623988
78124 India, 1978 Human III U70387
JEV-GKP-0945054 India, 2009 Human CSF I HM156572
P3 China, 1949 Mosquito III U47032
SA14 China, 1958 Mosquito III U14163
SA14-14-2 China, unavailable Vaccine III D90195
GZ04-36 China, 2004 Mosquito III DQ404112
XZ0934 China, 2009 Mosquito V JF915894
SH-53 China, 2001 Mosquito I AY555757
JKT1749 Indonesia, 1979 Mosquito II U70405
JKT9092 Indonesia, 1981 Mosquito IV U70409
JKT7003 Indonesia, 1981 Mosquito IV U70408
JKT5441 Indonesia, 1981 Mosquito II U70406
2372 Thailand, 1979 Human I U70401
Chiang Mai Thailand, 1964 Human III U70393
HK8256 Taiwan, 1972 Mosquito III U03691
IND/10/WB India, 2010 Human CSF III JN189785
IND/10/WB/JEV28 Midnapore, India, 2010 Human CSF I JN703381
IND/10/WB/JEV21 Midnapore, India, 2010 Human CSF I JN703382
IND/10/WB/JEV38 South 24 Pgs, West Bengal, India, 2010 Human CSF III JN968470
IND/10/WB/JEV37 Hooghly, West Bengal, India, 2010 Human serum III JN968471
IND/10/WB/JEV44 Malda, West Bengal, India, 2010 Human CSF III JN968468
IND/10/WB/JEV41 Malda, West Bengal, India, 2010 Human CSF III JN968469
IND/10/WB/JEV40 Howrah, West Bengal, India, 2010 Human CSF III JN968472
IND/10/WB/JEV39 Birbhum, West Bengal, India, 2010 Human CSF III JN968473
IND/10/WB/JEV42 Murshidabad, West Bengal, India, 2010 Human serum III JN968474
IND/10/WB/JEV43 Murshidabad, West Bengal, India, 2010 Human serum III JN968475
IND/10/WB/JEV35 Nadia, West Bengal, India, 2010 Human serum III JN968476
IND/10/WB/JEV36 Nadia, West Bengal, India, 2010 Human serum III JN968477
MVEV-1-51 Australia, 1951 Human   AF161266
  1. All strains/isolates are JEV, except Murray valley encephalitis virus strain (MVE-1-51) used as out group for phylogenetic analysis in this study.