Figure 5
From: Hidden evolutionary complexity of Nucleo-Cytoplasmic Large DNA viruses of eukaryotes
Phylogenetic trees of the ancestral NCLDV genes for ribonucleotide reductase subunits. (A). Ribonucleotide reductase, large subunit. (B). Ribonucleotide reductase, small subunit. Branches with bootstrap support less than 50 were collapsed. For each sequence, the species name abbreviation and the gene identification numbers are indicated; env stands for sequences retrieved from env_nr database. Species abbreviations: Acatu, Acanthocystis turfacea Chlorella virus 1; Acypi, Acyrthosiphon pisum; Aedta, Invertebrate iridescent virus 3; Afrsw, African swine fever virus; Ambti, Ambystoma tigrinum virus; Anghe, Anguillid herpesvirus 1; Canvi, Canarypox virus; Crymu, Cryptosporidium muris RN66; Cyphe, Cyprinid herpesvirus 3; Dicdi, Dictyostelium discoideum AX4; Ectsi, Ectocarpus siliculosus virus 1; Emihu, Emiliania huxleyi virus 86; Felsp, Feldmannia species virus; Frano, Francisella novicida U112; Frovi, Frog virus 3; Helze, Heliothis zea virus 1; Infsp, Infectious spleen and kidney necrosis virus; l1_Invir, Invertebrate iridescent virus 3; l2_Invir, Invertebrate iridescent virus 6; Leibr, Leishmania braziliensis MHOM/BR/75/M2904; Lodel, Lodderomyces elongisporus NRRL YB-4239; Lymch, Lymphocystis disease virus - isolate China; Lymdi, Lymphocystis disease virus 1; Musdo, Musca domestica salivary gland hypertrophy virus; Ostvi, Ostreococcus virus OsV5; Parbu, Paramecium bursaria Chlorella virus NY2A; ParFR, Paramecium bursaria Chlorella virus FR483; Parte, Paramecium tetraurelia strain d4-2; Phatr, Phaeodactylum tricornutum CCAP 1055/1; Phoda, Photobacterium damselae subsp. damselae CIP 102761; Shrwh, Shrimp white spot syndrome virus; Singr, Singapore grouper iridovirus; Thaps, Thalassiosira pseudonana CCMP1335; Thepa, Theileria parva strain Muguga; Trybr, Trypanosoma brucei; Ustma, Ustilago maydis 521; Vibha, Vibrio harveyi 1DA3; Bp, Proteobacteria; E8, Stramenopiles; Ea, Amoebozoa; Ec, Alveolata; Ek, Euglenozoa; El, Opisthokonta; c1, Asfarviridae; k1, Herpesvirales; l1, Chloriridovirus; l2, Iridovirus; l3, Lymphocystivirus; l4, Megalocytivirus; l5, Ranavirus; o1, Nimaviridae; q1, Chlorovirus; q2, Coccolithovirus; q3, Phaeovirus; q6, unclassified Phycodnaviridae; u1, Chordopoxvirinae; vi, Nudivirus; z3, unclassified dsDNA viruses.