Primer | Sequence | Position (nt) |
---|---|---|
First PCR | Â | Â |
 BF | 5’- ACG GGG CGC ACC TCT CTT TA -3’ | 1 519–1 538 |
 HBAS-4 V | 5’- ATA GGG GCA TTT GGT GGT CT -3’ | 2 316–2 297 |
 PF | 5’- TTA TGC CTG CTA GGT TYaT ATC C -3’ | 2 635–2 656 |
 S4R | 5’- AGA AGA TGA GGC ATA GCA GC -3’ | 434-415 |
Second PCR | Â | Â |
Mix A | Â | Â |
 HB | 5’- ACC GTG AAC GCC CAC MbGG AA -3’ | 1 617–1 636 |
 BJA-RV | 5’- TTC TTT ATA CGG GTC AAT GTC CAT G -3’ | 1 924–1 900 |
 DF | 5’- GCA GAA TCT TTC CAC CAG -3’ | 2 853–2 870 |
 C1F | 5’- TCA CTC CRcC CAC ACG GCA A -3’ | 3 047–3 065 |
 C2F | 5’- CAC CGA ACA TGG AGA RcCA CA -3’ | 147-166 |
 PR | 5’- TTG GTG AGT GAT TGG AGG TTG -3’ | 341-321 |
Mix B | Â | Â |
 AF1 | 5’- GCC TAC TAG ATT CTA TCC TAC CCA C -3’ | 2 645–2 669 |
 AF2 | 5’- GCC TAC TAG ATT TTA TCC TAA CAG C -3’ | 2 645–2 669 |
 BA1R | 5’- CTC GCG GAG ATT GAC GAG ATG T -3’ | 111-132 |
Mix C | Â | Â |
 HB | 5’- ACC GTG AAC GCC CAC MbGG AA -3’ | 1 617–1 636 |
 BA | 5’- GTG TCG AGRc AGA TCT CGA ATA -3’ | 1 998–1 978 |
 BJ | 5’- TGA TCT TTA GGC CCA TGT TAG T -3’ | 2 192–2 171 |