Table 3 Primers for sequencing of genome of HPIV-3 LZ22 strain
From: Identification of a natural human serotype 3 parainfluenza virus
Fragment (Positions) | Primer (5'-3') | Sequence |
|---|---|---|
NP | NPS | ACCAAACAAGAGAAGAGACTTGTTTGG |
(1-1843) | NPA | TTCCTCTTCCCAAGAATCCATGATTTG |
PP | PPS | GGACGAAATAGACGATCTGTTCAATGC |
(1616-3485) | PPA | CTGTTCATTGACTTTGAGTGGTAATGG |
M | MS | TCACTAGTTGCAGTCATCAACAACAGC |
(3452-5183) | MA | CCCTTTGGGACTATTGACCAATACACC |
F | FS | TGCAATTTTCCAACCTTCTTTACCTGG |
4724-7104) | FA | AAGAAGCCTTGTATTCACTCCTGACTG |
HN | HNS | AAATCGAGTGGATCAAAATGATAAGCC |
(6644-8744) | HNA | TGTGTAATTGTGCTATTCTACCTTTAACG |
L1 | L1S | TGTTCAAAACAGAGATTCCAAAAAGCTGC |
(8489-10684) | L1A | TCCAAATAGAGCCGTTGATTCATATCTCC |
L2 | L2S | CTGGAGATATGAATCAACGGCTCTATTTG |
(10654-12958) | L2A | AATTGCATGTATAATGTCAGTATCATCCC |
L3 | L3S | TATTGGGATGATACTGACATTATACATGC |
(12926-15461) | L3A | ACCAAACAAGAGAAGAACTCTGCTTGGTA |
3'RACE (617) | S | TTGAACATAGAGCACAGACTGG |
| Â | A* | TACCGTCGTTCCACTAGTGATTT |
(399) | Sn | GCTGATACGGATTCAGATTCATTCAAATTATC |
| Â | An* | CGCGGATCCTCCACTAGTGATTTCACTATAGG |
5'RACE | S* | CATGGCTACATGCTGACAGCCTA |
(15088) | A | AATAGCTCCTAAACATGATGGATACCC |
| Â | Sn | CGCGGATCCACAGCCTACTGATGATCAGTCGATG |
(15423) | An | TGACATCTGCATTACTTCCATTTGTTGTTAGG |