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Table 4 Percent nucleotide and amino acid sequence similarities of partial L segment of MJNV* compared with other hantaviruses

From: Genetic diversity of Imjin virus in the Ussuri white-toothed shrew (Crocidura lasiura) in the Republic of Korea, 2004-2010

Strain MJN 04-3 MJN 04-39 MJN 04-55 MJN 05-8 MJN 05-11 MJN 05-14 MJN 09-21 MJN 09-136 MJN 10-8 TPM SWS HTN SEO PUU SN
MJN 04-3   89.1 88.8 97.9 98.7 89.4 98.6 98.4 99.2 71.2 49.9 52.9 50.7 54.4 52.4
MJN 04-39 98.6   98.4 88.9 88.4 99.4 88.9 88.8 88.8 70.2 51.4 53.4 51.0 54.8 54.2
MJN 04-55 97.1 97.6   88.6 88.1 99.1 88.6 88.4 88.4 69.4 50.9 52.6 50.7 54.2 52.5
MJN 05-8 100 98.6 97.1   97.6 89.2 98.7 98.9 97.6 71.2 51.0 52.6 51.0 54.4 52.2
MJN 05-11 99.0 97.6 96.2 99.0   88.8 98.3 98.1 98.4 70.8 50.2 52.5 51.2 54.4 51.9
MJN 05-14 99.0 99.5 98.1 99.0 98.1   89.2 89.1 89.1 71.2 50.2 53.4 51.0 55.0 53.0
MJN 09-21 100 98.6 97.1 100 99.0 99.0   99.8 98.3 70.5 50.4 52.8 50.9 54.7 51.9
MJN 09-136 100 98.6 97.1 100 99.0 99.0 100   98.1 70.7 50.4 52.6 50.7 54.5 51.7
MJN 10-8 99.5 98.1 96.7 99.5 98.6 98.6 99.5 99.5   71.5 50.2 53.1 50.7 53.9 52.5
TPM 67.6 67.6 66.7 67.6 67.6 68.1 67.6 67.6 67.1   50.5 51.7 50.9 55.2 52.8
SWS 39.5 40.5 39.0 39.5 39.5 40.0 39.5 39.5 39.5 62.2   63.2 61.5 56.8 58.7
HTN 42.9 42.4 41.9 42.9 42.4 42.9 42.9 42.9 42.9 43.1 55.9   70.2 58.2 57.6
SEO 41.0 41.0 40.0 41.0 40.5 41.0 41.0 41.0 41.0 38.4 58.2 77.9   58.2 59.3
PUU 45.7 45.2 44.8 45.7 45.7 45.7 45.7 45.7 45.2 46.4 53.1 54.0 77.9   64.6
SN 45.7 46.7 45.2 45.7 45.7 46.2 45.7 45.7 45.7 46.4 54.9 54.5 55.4 64.8  
  1. *MJNV strains 04-3, 05-11, 10-8 from Paju City; MJNV strains 04-39, 04-55, 05-14 from Yeoncheon-gun; MJNV strain 05-8, 09-21, 09-136 from Pocheon City.
  2. Amino acid similarity shown on bottom triangle and nucleotide similarity shown on top triangle.