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Table 2 Evolutionary relationship along ORF of HRV-CU072 compared with the most closely matched N4 strain.

From: Complete coding sequence characterization and comparative analysis of the putative novel human rhinovirus (HRV) species C and B

 

Structural proteins

Nonstructural proteins

Viral protein

VP4

VP2

VP3

VP1

2A

2B

2C

3A

3B

3C

3D

Variation (nt)

55

209

176

213

81

63

316

59

20

139

397

Nucleotide variation (nt%)

27

26

25

26

19

21

32

26

30

25

29

Amino acid variation (aa%)

14

31

25

23

16

19

26

12

23

16

24

NS variation (aa)

9

80

56

63

23

19

34

9

5

29

70

NS variation (%)

19

58

42

44

41

43

19

20

36

25

30

NC-NS variation (%NC)

33

40

38

29

48

21

44

33

40

14

30

  1. NS = nonsynonymous, NC = nonconservative amino acid
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Virology Journal

ISSN: 1743-422X