Identification of H-2d Restricted T Cell Epitope of Foot-and-mouth Disease Virus Structural Protein VP1

Table 1 Amino acid sequence of the predicted VP1 protein CD8⁺ T cell epitopes and BIMAS scores

MHC-restriction	Code	Start Position	Subsequence Residue Listing	Score
H-2Ld	pL1	103	NPTAYHKGPF	300
	pL2	117	LPYTAPHRVL	150
	pL3	89	VPNGAPETAL	150
	pL4	9	DPVTTTVENY	72
	pL5	121	APHRVLATVY	60
	pL6	110	GPFTRLALPY	60
	pL7	45	QSPTHVIDLM	37.5
	pL8	42	IPSQSPTHVI	30
	pL9	158	LPASFNFGAI	30
	pL10	188	RPLLAVKVTS	30
H-2Dd	pD1	138	TGNAGRRGDL	30
	pD2	109	KGPFTRLALP	24
	pD3	141	AGRRGDLGS	3
	pD4	62	VGALLRAATY	10
	pD5	45	QSPTHVIDLM	7.2
	pD6	41	KIPSQSPTHV	7.2
	pD7	33	GFIMDRFVKI	6
	pD8	116	ALPYTAPHRV	6
	pD9	56	THQHGLVGAL	3
	pD10	197	SQDRHKQRII	20
H-2Kd	pK1	106	AYHKGPFTRL	3456
	pK2	33	FIMDRFVKI	1920
	pK3	163	NFGAIRATVI	1152
	pK4	71	YYFSDLEIVV	720
	pK5	70	TYYFSDLEIV	600
	pK6	184	LYCPTPLLAV	600
	pK7	204	RIIAPAKQLL	115.2
	pK8	52	DLMQTHQHGL	80
	pK9	77	EIVVRHDDNL	80
	pK10	175	LLVRVKRAEL	80

ISSN: 1743-422X