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Table 1 Primers used in this study

From: Sequencing of bovine herpesvirus 4 v.test strain reveals important genome features

name

Sequence

Coordinates according to Genbank

Bo1 Fwd

5'- ATGGAGGGTGATGGATTCATG-3'

460-440a

Bo1 Rev

5'- TTAAGGCCTCATTCCAGGAAG-3'

272-292a

Bo5 Fwd

5'- GCTACAGAAAATGGCCAGTAAAG-3'

20366-20342a

Bo5 Rev

5'- TCATGTCCTGAGTGGGTCTATG-3'

19170-19191a

Bo6 Fwd

5'- ATGGTCATCCTAAATGCTCAAG -3'

20297-20318a

Bo6 Rev

5'- TCACCTAGTGTTGCAACCCC -3'

20497-20478a

Bo7 Fwd

5'- ATGGAGACAATTTCCATAAACTG -3'

20994-20972a

Bo7 Rev

5'- CTAGCTGGGGTAGAGTGATC -3'

20671-20690a

ORF67.5 Fwd

5'- ATGGCTGATGGTGATGTTTTAG -3'

93144-93123a

ORF67.5 Rev

5'- TCAATGTTTGTCCAGAGCACT -3'

92881-92901a

Bo12 Fwd

5'- ATGGGGGCGCTATTTGGGC -3'

97442-97460a

Bo12 Rev

5'- TCAACTGATGAAACCCACCC -3'

97525-97506a

Bo13 Fwd

5'- ATGCGTCTCGATGGCAAGC -3'

98838-98856a

Bo13 Rev

5'- CTATGGTTGTTTTTTAAAGAAAATC -3'

98981-98957a

ORF75 Fwd

5'- ATGTATCCCAGATACAGTAACA -3'

103606-103585a

ORF75 Rev

5'- TTACATTTTATTTTTCAGACACCA -3'

100274-100297a

prDNA Fwd 1

5'- GGAGCCCAAAACCAAAAGAG -3'

870-889b

prDNA Rev 1

5'- CTCTTTTGGTTTTGGGCTCC -3'

889-870b

prDNA Fwd 2

5'- CGTAGGCCTCACATTCAGC -3'

908-926b

prDNA Rev 2

5'- GCTGAATGTGAGGCCTACG -3'

926-908b

prDNA Fwd 3

5'- CGAGAGATGGTTCTTGCACA -3'

940-959b

prDNA Rev 3

5'- TGTGCAAGAACCATCTCTCG -3'

959-940b

BAC Rev

5'- TTGCCAATCCCAAAAAGAAG -3'

9859-9878c

  1. a according to Genbank JN133502 sequence (BoHV-4 V.test strain long unique region)
  2. b according to Genbank JN133504 sequence (BoHV-4 V.test strain prDNA inner region)
  3. c according to Genbank AY665170.1 sequence (pBeloBAC modified)